PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g938920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 400aa    MW: 44610.2 Da    PI: 6.1936
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g938920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-12252297454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h e+Er+RR+++N++f  Lr ++P+       +++Ka+ L  Av YI++L
  Pd.00g938920.m01 252 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 297
                       799***********************6.....4***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MEELIISPSS SSSLVSLPQE TSPSLQQRLQ FIVQSQPDWW SYAIFWQPSN DHQDNGRLFL  60
TWGDGHFQGS KDPSAKHHNN PYGILSERRK ILKGIQSLIN DNPDHHQDSI MDHMGLDADV  120
SDGEWFYVMS LARSFSIGES AISASVPGKA FSSGSVVWLT GAHELQFYNC DRAKEAQMHG  180
FQTLVCIPTP TGVLEMGSSD SIRENWSLVQ QAKSLFGSDL ICSPDYSDSD GPKRTPKKRG  240
RKPGLGRDTP LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA VSYINELKTK  300
VDELESQIAK PPSSSANGSG LEVEVKIVGT DAMIRVQSEN VNYPSARLMA ALRDLELQIH  360
HASLSCINEL MLQDIVVKVP ENMRSEDILK SALLRILDQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-88bHLH family protein