PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g938620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 431aa MW: 48458.4 Da PI: 5.7512

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g938620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.7e-14	218	269	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+ Pd.00g938620.m01 218 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 269 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MERLQGPIDP CFFGEHWDFQ CLEQGLSTTE SLRFEEEEEA AHLSIPSLED KMPFLQMLQT 60 VNSPPPYFPL KEPSFQALLR LQHLKNPWEL GKAYMPETET QLQTALEIES CVTHDMVELH 120 SPVKSEAKDL HNHPHSVSAG NLEAVSSECI QDQEQPNSAE INCCRKGNNS SGSPPPTWAQ 180 AQNEPEQTQY PKSPPVTRER RKRKRTRPTK NKEEVESQRM THIAVERNRR RQMNDHLNVL 240 RSLMPTSYIQ RGDQASIVGG AIDFVKELEQ LLQSLEAQKR MRRADQGSNG DNSFSSSSSS 300 SSAIMAMPSN GMFMSLSQCR IGSHEEGTTT TRLEDEVTAQ NKSEAADIDV TVIQTHVNLK 360 IQCQRRAGQL MKAILALEDL RLAVLHLNIT SSQDTVLYSF NLKIEEGCKL GSADEIARAV 420 HQIFSFINGC S

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MERLQGPIDP CFFGEHWDFQ CLEQGLSTTE SLRFEEEEEA AHLSIPSLED KMPFLQMLQT  60
VNSPPPYFPL KEPSFQALLR LQHLKNPWEL GKAYMPETET QLQTALEIES CVTHDMVELH  120
SPVKSEAKDL HNHPHSVSAG NLEAVSSECI QDQEQPNSAE INCCRKGNNS SGSPPPTWAQ  180
AQNEPEQTQY PKSPPVTRER RKRKRTRPTK NKEEVESQRM THIAVERNRR RQMNDHLNVL  240
RSLMPTSYIQ RGDQASIVGG AIDFVKELEQ LLQSLEAQKR MRRADQGSNG DNSFSSSSSS  300
SSAIMAMPSN GMFMSLSQCR IGSHEEGTTT TRLEDEVTAQ NKSEAADIDV TVIQTHVNLK  360
IQCQRRAGQL MKAILALEDL RLAVLHLNIT SSQDTVLYSF NLKIEEGCKL GSADEIARAV  420
HQIFSFINGC S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	205	RRKRKR
2	219	230	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	6e-77	bHLH family protein