PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g938530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 769aa MW: 83966.8 Da PI: 5.9867

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g938530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pd.00g938530.m01 24 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV 120 AEKDGKLLSS ASSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC 180 SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK 240 KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS 300 LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT IEHESNASRS SVHQSFPAFH 360 PPFTPFHHGQ KDYQSFLHMS STFSSLIVSS LLQNPAAHAA ASFAATFWPY ANAENAEDSP 420 TCPPGGFPSR QMNSPPSMAA IAAATVAAAS AWWASHGLLP LCAPVQTAFS CPPVSMTGIP 480 SMDTGEAPAA NIERGENSLQ IPSLQDQQVD PEHLEAVEAQ HPASKSPSVS SSHSDNGGAE 540 PNTVLKAASD EKVVASTEEV NDSNNAKTRK QVDRSSCGSN TPSSSEVETD ALEKQENGKE 600 ELKEPDLNHP ASDSTYRRSR SIINISDPWK EVSEEGRMAF QALFSREVLP QSFSPPPKDK 660 EHQTTTEEGK QNAEEKDEDA SLLDLNKKTW VPFSCHPEVE KNVSPVGDDN AEGLLTIGLS 720 QGKLKARRTG FKPYKRCSVE ANENRAANAI SHCEEKGPKR LRLEGEAQN

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV  120
AEKDGKLLSS ASSSHCKQVV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC  180
SSVSSANKNS IPTQVALRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK  240
KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS  300
LGACNQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT IEHESNASRS SVHQSFPAFH  360
PPFTPFHHGQ KDYQSFLHMS STFSSLIVSS LLQNPAAHAA ASFAATFWPY ANAENAEDSP  420
TCPPGGFPSR QMNSPPSMAA IAAATVAAAS AWWASHGLLP LCAPVQTAFS CPPVSMTGIP  480
SMDTGEAPAA NIERGENSLQ IPSLQDQQVD PEHLEAVEAQ HPASKSPSVS SSHSDNGGAE  540
PNTVLKAASD EKVVASTEEV NDSNNAKTRK QVDRSSCGSN TPSSSEVETD ALEKQENGKE  600
ELKEPDLNHP ASDSTYRRSR SIINISDPWK EVSEEGRMAF QALFSREVLP QSFSPPPKDK  660
EHQTTTEEGK QNAEEKDEDA SLLDLNKKTW VPFSCHPEVE KNVSPVGDDN AEGLLTIGLS  720
QGKLKARRTG FKPYKRCSVE ANENRAANAI SHCEEKGPKR LRLEGEAQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	1e-112	MYB_related family protein