PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g935470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 459aa MW: 50982.1 Da PI: 7.0183

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g935470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.9	3.7e-08	268	309	8	54
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+ri+++ + Lr l+Pk + K++ +i AveYI +L Pd.00g935470.m01 268 AERNRRSRIKDGHFALRALVPKiS------KMDIPAIIGDAVEYIEEL 309 7*******************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE 60 PQSAKLCRDG FLKHPIRTKA CEALAQLPSS MPLYSGIHTE VIISAQPRWL SGHVNASGSN 120 PSQSYDFVGT RVLIPVLSDL IELFSTKNIP ENQKILNEFH VDPLPEECPE KLLPSLNLAN 180 FIPGPQVFPS SVSQTTSCPI LEGSSSGSNP SSEHPLLSSH SRKSRRGDNL LQQQAGLATG 240 SGTVVEKHMA KVTRKTGSGQ YQSKNLFAER NRRSRIKDGH FALRALVPKI SKMDIPAIIG 300 DAVEYIEELK KKVKELEDEL REIEEEEDLT KNKTDVKILA SDMRKEGSIC LISTEHKQGS 360 SSFVQKSPTA VQVEVNQIGK RDCLIKLFYE QSRGGFASLM ENMDSLGLQV VDANVTTFDG 420 NVLNILKVQA NRDIQAKKLR DKLIRLTRET NQTVHKGIN

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MRNLEGVAES LRPLVESKQW DYCVVWKLGD DPSRFIEMMG CCCGGGYEYD CVNVKEEEGE  60
PQSAKLCRDG FLKHPIRTKA CEALAQLPSS MPLYSGIHTE VIISAQPRWL SGHVNASGSN  120
PSQSYDFVGT RVLIPVLSDL IELFSTKNIP ENQKILNEFH VDPLPEECPE KLLPSLNLAN  180
FIPGPQVFPS SVSQTTSCPI LEGSSSGSNP SSEHPLLSSH SRKSRRGDNL LQQQAGLATG  240
SGTVVEKHMA KVTRKTGSGQ YQSKNLFAER NRRSRIKDGH FALRALVPKI SKMDIPAIIG  300
DAVEYIEELK KKVKELEDEL REIEEEEDLT KNKTDVKILA SDMRKEGSIC LISTEHKQGS  360
SSFVQKSPTA VQVEVNQIGK RDCLIKLFYE QSRGGFASLM ENMDSLGLQV VDANVTTFDG  420
NVLNILKVQA NRDIQAKKLR DKLIRLTRET NQTVHKGIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	1e-35	bHLH family protein