PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g933910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 334aa    MW: 36014.1 Da    PI: 9.872
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g933910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-1394138347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Pd.00g933910.m01  94 AWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTE ASGGGGGAAS AENGIMLFGV RVTEGNEFRK SASMNNLSQY  60
EQNIQADSNG DAGYASDDVV HASGHRRERK RGVAWTEEEH RLFLLGLQKV GKGDWRGISR  120
NFVKTRTPTQ VASHAQKYFL RRNNHNRRRR RSSLFDITTD TPLMNSLMDE DIGQQKHQET  180
ATALPYPQQP QPQMNLGRHI LGGFPVSTFP MALSPGVLPV SGETSSVDNL TSSIGPNLNL  240
QNEVPQQAKG APTTLSAKLI RPIPLHPVPP PPSSKMAGLN LNNKYTAPPT RDPSPLSLKL  300
ATTSSEEQSP NTASSHSSAF QGMSSGSDSI ISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.24e-72MYB_related family protein