PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g931470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 520aa MW: 59433.2 Da PI: 8.2217

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g931470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	359	407	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v q G g+W++ r + +Rt+ ++k++w+++l Pd.00g931470.m01 359 SWTSSEVMKLIEGVSQCGVGRWSAMKRLLFsscSHRTAVDIKDKWRNLL 407 6*********************888887***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MFQGMDNAVC HGRISLPTCQ EYLWEAKHSD KVFKLEGGPD SCLQNAGLES HSPGVYKEYC 60 GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQKRQLVFRN MFRYETPIID KQWPKYSISP 120 GLQNCFELES GSNLAECGLM TKKNEGKTVL SSSIEFFGKD TGTIEGSLSD EGMSRDLQVK 180 WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAQSKSKFYS 240 RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDKSY EVGCIQVPFG LPVEAGQLEE 300 HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE CVLRRSTQKG SKQIKHYTSW 360 TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK DKWRNLLKAS CTQLQKERKI 420 KRDISKQASD HVPESVLQRV RELAVIYPYP RRKRIFSKIP RYRDRAGQLQ CLESTFCIQG 480 ICCNNNSEDC KDHRLLGSSE KLEIEYSPAK SREEISEDEN

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MFQGMDNAVC HGRISLPTCQ EYLWEAKHSD KVFKLEGGPD SCLQNAGLES HSPGVYKEYC  60
GAEMADLSCE STPRLGYKDN RSSLLLDHMS VQKRQLVFRN MFRYETPIID KQWPKYSISP  120
GLQNCFELES GSNLAECGLM TKKNEGKTVL SSSIEFFGKD TGTIEGSLSD EGMSRDLQVK  180
WKKLADLESL KTSNSRVSEI ELCSSDERDK AGAFAMQKRS RRPPRRYIEE LAQSKSKFYS  240
RKCGVACKRS KNSFLHVRSD KNNRQKETQE ETLLCQDKSY EVGCIQVPFG LPVEAGQLEE  300
HNSSLNSEDC KEDHKLLRSS EKLEIEYSPA KSREEISDDE CVLRRSTQKG SKQIKHYTSW  360
TSSEVMKLIE GVSQCGVGRW SAMKRLLFSS CSHRTAVDIK DKWRNLLKAS CTQLQKERKI  420
KRDISKQASD HVPESVLQRV RELAVIYPYP RRKRIFSKIP RYRDRAGQLQ CLESTFCIQG  480
ICCNNNSEDC KDHRLLGSSE KLEIEYSPAK SREEISEDEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-28	MYB_related family protein