PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g927980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 682aa MW: 76785.3 Da PI: 6.3992

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g927980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.6e-07	581	625	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + WT+eE+++++d+ k + W++ +r + ++t+++++s+++++ Pd.00g927980.m01 581 LQWTAEEEKRFKDLLKSNSPSFWNRASRWFR-KKTRENLVSYYFNV 625 57***************************.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MNKFLSADQK VWKVGKEVVG YVQKLGSMSQ LVLSPTHHFN NSSAPTLISA VLCSHPCLLC 60 RLCSSVNYHV GSFARQNQKE SSTQKCSDSL IGFSRVKSKF MAGWSSLTPG SVLDCVETND 120 AYQKNGSCID SDIDEIGDRG VVRPIPAVID DRQPVDLFKL FCLVRDRGGY DWVSKNSLWS 180 FVAKELGLDG GATASVKLIY FKYLNELEKW FREGCNSRSS GNGQSGLYGE FQLLSSESER 240 EFRDLLLDGP EQKGKGDGPV QFESDENGKI EFNLPDTKDA YGMHAGADQC KDDDDEKVCN 300 DDQNGVLISL NSLNKKENDR KRKRESLSGM LNWVVQIAKQ PNDPSIGVIP GPTNWKEHKG 360 DECWFQVIRA REALLLRRNV DSKTEESLLQ KKLKTHPLLY EDNIVAGHQS SERLRCSERF 420 PNSVKSRSCP CCSSCSVPQS NLISPRKKEL DNISKEQAPA EVDLLATNTM VCPSVDAPHE 480 KHVSVGTLFQ ADVPEWTGVA SESDIKWLGT RVWPLQCEED SSLHETDLTG KGRPDLCGCR 540 LPGSVVCIRF HIAEARMKLK RELGSLFYRW RFDRMGEEVS LQWTAEEEKR FKDLLKSNSP 600 SFWNRASRWF RKKTRENLVS YYFNVFLVQS RSYQNRVTPK NIDSDDDETE FGSFSNGFGH 660 DAVEVSANFV ACSHNQQCTD LD

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MNKFLSADQK VWKVGKEVVG YVQKLGSMSQ LVLSPTHHFN NSSAPTLISA VLCSHPCLLC  60
RLCSSVNYHV GSFARQNQKE SSTQKCSDSL IGFSRVKSKF MAGWSSLTPG SVLDCVETND  120
AYQKNGSCID SDIDEIGDRG VVRPIPAVID DRQPVDLFKL FCLVRDRGGY DWVSKNSLWS  180
FVAKELGLDG GATASVKLIY FKYLNELEKW FREGCNSRSS GNGQSGLYGE FQLLSSESER  240
EFRDLLLDGP EQKGKGDGPV QFESDENGKI EFNLPDTKDA YGMHAGADQC KDDDDEKVCN  300
DDQNGVLISL NSLNKKENDR KRKRESLSGM LNWVVQIAKQ PNDPSIGVIP GPTNWKEHKG  360
DECWFQVIRA REALLLRRNV DSKTEESLLQ KKLKTHPLLY EDNIVAGHQS SERLRCSERF  420
PNSVKSRSCP CCSSCSVPQS NLISPRKKEL DNISKEQAPA EVDLLATNTM VCPSVDAPHE  480
KHVSVGTLFQ ADVPEWTGVA SESDIKWLGT RVWPLQCEED SSLHETDLTG KGRPDLCGCR  540
LPGSVVCIRF HIAEARMKLK RELGSLFYRW RFDRMGEEVS LQWTAEEEKR FKDLLKSNSP  600
SFWNRASRWF RKKTRENLVS YYFNVFLVQS RSYQNRVTPK NIDSDDDETE FGSFSNGFGH  660
DAVEVSANFV ACSHNQQCTD LD