PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g927620.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 291aa    MW: 32939 Da    PI: 4.9144
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g927620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.2e-30106163258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh
  Pd.00g927620.m01 106 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 163
                       79*************************998**************************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MENSQIPYCF APLSIEEEDD FFHALPQLFE ATAALDELEE LYKPFYPVLQ PSTPPIILAS  60
SMSVPQEAIT VEVPKKLKES STICKKIRKN QSKRVVKEVR AEDLFSDVWA WRKYGQKPIK  120
GSPYPRSYYR CSSSKGCSAR KQVERSCSNP ETFIITYTAE HNHVHPTRRN SLAGSTRSKF  180
PSSKNKDKCK SSLNSPAMTN LAASIEEDHD VQSASTNAVK EEAQLLLEED EISHENVMLD  240
VMLSDEMIPS FEDLDRELEP VMDGWFLDQF SDNFPSPWFN IGHSNTVTGA C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.15e-39WRKY family protein