PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g927620.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 291aa MW: 32939 Da PI: 4.9144 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.2e-30 | 106 | 163 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh Pd.00g927620.m01 106 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 163 79*************************998**************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MENSQIPYCF APLSIEEEDD FFHALPQLFE ATAALDELEE LYKPFYPVLQ PSTPPIILAS 60 SMSVPQEAIT VEVPKKLKES STICKKIRKN QSKRVVKEVR AEDLFSDVWA WRKYGQKPIK 120 GSPYPRSYYR CSSSKGCSAR KQVERSCSNP ETFIITYTAE HNHVHPTRRN SLAGSTRSKF 180 PSSKNKDKCK SSLNSPAMTN LAASIEEDHD VQSASTNAVK EEAQLLLEED EISHENVMLD 240 VMLSDEMIPS FEDLDRELEP VMDGWFLDQF SDNFPSPWFN IGHSNTVTGA C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23550.1 | 5e-39 | WRKY family protein |