PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g927570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 351aa    MW: 39308.3 Da    PI: 4.7102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g927570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-194594255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Pd.00g927570.m01 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
                      789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGRKRKVSDG VEDRSSSEGT MAWDEMVKEA SAAAELGGAR RARKRFVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSHSPSS TPALPSKITN  120
LLLQRLKARN NSNSCSAPSA PLPINHHQMQ QHADHQEEEA GADFSETQYT DFLNDPEDYI  180
TSNNHDIISA SSIDYMTSSF ESCLTEKEEY STAREIDQMD HGNLSEVAQT YSGGDANFFV  240
DDIGASNYYS PSPFEIAEEM EEPVEPETYA DEPSMLRAAM KRMKYERKFS ASLYAFNGIP  300
ECLKLKIGSS SSSGNAKGRG ISESLSNLQR AYQKEEDVRR EDIITWTDEE R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-23ERF family protein