PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g925640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 344aa MW: 38301.5 Da PI: 7.5396 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.1 | 1.3e-12 | 167 | 213 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A +YIk+Lq Pd.00g925640.m01 167 DHIIAERKRREKLSQRFIALSAMVPGL-----KKMDKASVLGDALKYIKQLQ 213 699************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MAISSIGGMS ELGMEDPYFI NQWHMNSLDE VSMLPLAAAF GENFNQSHFH PNFNLKTSMD 60 SSHSGIDRPM KQLKTDGWSS CKTDQHGSNP QVASSPNILS FVNSNSTNQM GVLKPKEEAG 120 VCSKSNNSLP SDILLSQSSF GNQSYLFKAS QGTKGVNTNT RLSTTQDHII AERKRREKLS 180 QRFIALSAMV PGLKKMDKAS VLGDALKYIK QLQDKVKTLE EQTRKKNMES VVFVKKTQLF 240 ANDDNSSSEE NNSSGPFDET LPEIEARFCD NNVMIRIHCE KRKGVVEKTI AEVEKLQLKF 300 INSSVLTFGG CALDVTIIAQ MEVEFSLSVK ELVKNLRSAF DMFM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 172 | 177 | ERKRRE |
2 | 173 | 178 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 4e-66 | bHLH family protein |