PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g925390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 301aa    MW: 33785.3 Da    PI: 9.5561
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g925390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-0959106354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  Pd.00g925390.m01  59 IQKADREKLRRDRLNEQFLELGNVLDPD----RPKNDKATILADTIQVLKDL 106
                       56789*******************9997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGQQLKHEGF IQSAPPPFPS AIEFPQPPPD SRAPSGCSQP NSSERPEGET KDCLTARKIQ  60
KADREKLRRD RLNEQFLELG NVLDPDRPKN DKATILADTI QVLKDLTSEV DKLKADCASL  120
TEESRPIPMH PHMQPYHYFP NQNPGVIPNP CSTFVPYVTP NTLVEQQSTQ YVSPVVHPRS  180
RSHVSGKQDS RNKLSGESKI DRSEDSNDVT TELELKTPGS MTDQDLSSVR RKSQKSARKE  240
TKLVAQKLMT KKRKGVFLHE GGKGCWLVFI SKLSRIEAAA GIFRDSFVLR VKVNKGKYCH  300
E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246254QKLMTKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-48bHLH family protein