PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g923710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 859aa MW: 95166 Da PI: 6.697

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g923710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.6	4.9e-28	617	667	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ Pd.00g923710.m01 617 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIRKV 667 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 859 aa Download sequence
MDYGALMSNS SSCGTLYDTT MEVDFMDEIL FEGCWLQSNA GFNLLQQQPV CPPISQALTD 60 HPSHYFPPYD HQSNSTVAHL SMSPHQQIYQ EENTDGSYPE SHSSFVVEGN TEAGRRLWIG 120 PRANPGPSSS VKERLMLAIG YLKECTKGRD VLIQIWVPIK RGGRQYLTTH DQPFSLDPNC 180 KSLAGYRNVS KDYQFITEED SAESVGLPSR AFLGKLLEWT PDVCFFRSYE YPRIDYAQQY 240 DVRGSLALPI FENGSGTCLG VVEIVMTPQK VNYCPELEYV CQALEAVDLR SSQNFWPLCV 300 KTRDELFQAA LTEIVEVLAS VCKTHRLPLA QTWAPCIQQG KGGCRHSDEN YAHCVSTVDA 360 ACFVADLDIL GFHEACSEHH LFQGQGIVGT AFTIYKMCFA TDIKAFSKTE YPLSHHARMF 420 GLHAAVAIPF RSVYTGPADL VLEFFLPKDC QDPEEQKQML NSLCIVIQQA CRSLHVNVDK 480 ELEEEIMFPI REPVIGSDGG LHKEETQRLT SSPTEEPSGK ESSWIAHMIE AQQKGKGVSV 540 SLDYQTEERK EEFKVTTHWG NTQGSLHSGQ VFSEFGQLHQ SSGSHGNVEG GADSYSFGGR 600 RTSGGRKAGE KRRTKTEKTI SLPVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGITRWP 660 SRKIRKVGHS LKKLQLVIDS VQGAEGAIHI GSFYSSFPEL NSPKFPGSGQ YSSMNMSDHS 720 KQVNPQQHDQ SGLYSHVTTT KSPSSSCSQT SGPSVCVAGA QQHTITINTL GSGDALMTED 780 PVGMLKRACG DADLHASFQE ETKLIHRSQS HKSFSDNLSY ENLPPLPGSS GRSLRDGGVY 840 RVKATFRDEK NKVQHATKL

Sequence ? help Back to Top

Protein Sequence Length: 859 aa Download sequence

MDYGALMSNS SSCGTLYDTT MEVDFMDEIL FEGCWLQSNA GFNLLQQQPV CPPISQALTD  60
HPSHYFPPYD HQSNSTVAHL SMSPHQQIYQ EENTDGSYPE SHSSFVVEGN TEAGRRLWIG  120
PRANPGPSSS VKERLMLAIG YLKECTKGRD VLIQIWVPIK RGGRQYLTTH DQPFSLDPNC  180
KSLAGYRNVS KDYQFITEED SAESVGLPSR AFLGKLLEWT PDVCFFRSYE YPRIDYAQQY  240
DVRGSLALPI FENGSGTCLG VVEIVMTPQK VNYCPELEYV CQALEAVDLR SSQNFWPLCV  300
KTRDELFQAA LTEIVEVLAS VCKTHRLPLA QTWAPCIQQG KGGCRHSDEN YAHCVSTVDA  360
ACFVADLDIL GFHEACSEHH LFQGQGIVGT AFTIYKMCFA TDIKAFSKTE YPLSHHARMF  420
GLHAAVAIPF RSVYTGPADL VLEFFLPKDC QDPEEQKQML NSLCIVIQQA CRSLHVNVDK  480
ELEEEIMFPI REPVIGSDGG LHKEETQRLT SSPTEEPSGK ESSWIAHMIE AQQKGKGVSV  540
SLDYQTEERK EEFKVTTHWG NTQGSLHSGQ VFSEFGQLHQ SSGSHGNVEG GADSYSFGGR  600
RTSGGRKAGE KRRTKTEKTI SLPVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGITRWP  660
SRKIRKVGHS LKKLQLVIDS VQGAEGAIHI GSFYSSFPEL NSPKFPGSGQ YSSMNMSDHS  720
KQVNPQQHDQ SGLYSHVTTT KSPSSSCSQT SGPSVCVAGA QQHTITINTL GSGDALMTED  780
PVGMLKRACG DADLHASFQE ETKLIHRSQS HKSFSDNLSY ENLPPLPGSS GRSLRDGGVY  840
RVKATFRDEK NKVQHATKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein