PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g923210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 551aa MW: 61769.8 Da PI: 6.2816

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g923210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	102.4	4.5e-32	90	181	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ +++eHnHel+p Pd.00g923210.m01 90 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKEHNHELVP 181 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMSSATGSAS GIVVFGGGGS 60 GEIYLPEGDL LDLEPYDGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RRDGAIIQRQ 120 FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKASLSVKM QDSGKWVVSG FVKEHNHELV 180 PPDQVHCLRS HRQISGPAKT LIDTLQAAGM GPRRIMSALI KEYGGISKVG FTEFFKLYEK 240 SLESRNEKEV KADFETMNTA PVLKTPSPME KQASELYTKK IFMRFQEELV GTLTFTASKG 300 DDDGEIITYQ VAKFGEDHKA YYVKLNVLEM MATCSCQMFE FSGLLCRHVL AVFRVTNVLT 360 LPSHYILKRW TRNAKSSVML EERSSDVYTN YLESHTVRYN TLRHEAFKFV DGAKSSETYD 420 IALDALKEAA KKVAHAPKND GKTMVNGHVR GNLAGGASRI HYASGDHEGS SGQHLSEDDM 480 DKKIRELTNE LQCANRKCEV YRANLLSVLK DIEDHKLQLS IKRETATGPV LEFDEDHYFV 540 LQSLFAVLVE F

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMSSATGSAS GIVVFGGGGS  60
GEIYLPEGDL LDLEPYDGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RRDGAIIQRQ  120
FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKASLSVKM QDSGKWVVSG FVKEHNHELV  180
PPDQVHCLRS HRQISGPAKT LIDTLQAAGM GPRRIMSALI KEYGGISKVG FTEFFKLYEK  240
SLESRNEKEV KADFETMNTA PVLKTPSPME KQASELYTKK IFMRFQEELV GTLTFTASKG  300
DDDGEIITYQ VAKFGEDHKA YYVKLNVLEM MATCSCQMFE FSGLLCRHVL AVFRVTNVLT  360
LPSHYILKRW TRNAKSSVML EERSSDVYTN YLESHTVRYN TLRHEAFKFV DGAKSSETYD  420
IALDALKEAA KKVAHAPKND GKTMVNGHVR GNLAGGASRI HYASGDHEGS SGQHLSEDDM  480
DKKIRELTNE LQCANRKCEV YRANLLSVLK DIEDHKLQLS IKRETATGPV LEFDEDHYFV  540
LQSLFAVLVE F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-126	FAR1 family protein