PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g922160.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 561aa MW: 61328 Da PI: 6.3654

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g922160.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.8e-09	375	422	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g922160.m01 375 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 422 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDRFYNPNW 60 DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG 120 IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA 180 EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR 240 VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS 300 RKRKSGAELN DNSNAKRSKP NENNGNDQNG SVKAEEDTKG STSSDEKQTR TGPKPPEPPK 360 DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPG CNKVTGKALM LDEIINYVQS 420 LQRQVEFLSM KLASVNTRLD FNVDALMSKE IFQQNNSLPQ HPIFPLDSSA QAIYGHQRQQ 480 NPALQNNISN GAVDPLDTSL CQSLGMQLPP LSGFNSEGIP QFPAFGEDDL QTIVQMGYGQ 540 NPNRETELDG SNQVSHMKIE L

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSSEQ SPDRFYNPNW  60
DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGSSGE ISPHSQSLLG  120
IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA  180
EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR  240
VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS  300
RKRKSGAELN DNSNAKRSKP NENNGNDQNG SVKAEEDTKG STSSDEKQTR TGPKPPEPPK  360
DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPG CNKVTGKALM LDEIINYVQS  420
LQRQVEFLSM KLASVNTRLD FNVDALMSKE IFQQNNSLPQ HPIFPLDSSA QAIYGHQRQQ  480
NPALQNNISN GAVDPLDTSL CQSLGMQLPP LSGFNSEGIP QFPAFGEDDL QTIVQMGYGQ  540
NPNRETELDG SNQVSHMKIE L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	305	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-117	bHLH family protein