PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g920180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 296aa MW: 33025.8 Da PI: 10.2433

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g920180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.7	1.8e-31	228	286	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 D y+WrKYGqK++kgs++prsYY+C+s gCp++k+ver+ edp+++++tYeg+H+h+k Pd.00g920180.m01 228 DDYTWRKYGQKPIKGSPYPRSYYKCSSVrGCPARKHVERCLEDPTMLVVTYEGDHQHPK 286 99**********************988**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MNPGLDFKIH EAAQSSLKHA HHLFGCVSES KQKRSVQEVS LIAQDAVEEF RKLLALLDGS 60 LLSNQKRIRR GPLPKSHDIN QFFSAVHQSD QATANVIHSN SFSMAREKKP NPALQQGQSE 120 AGVVLPNNLI MGLNQFSQKP TSTSLISTDG SSLNTRMIHY SSSELLASRD CTSMFSSKRK 180 CGVKSEEATP RCLVSAGGCH CSKRRKLRIK RRIRVPALSN KLADIPPDDY TWRKYGQKPI 240 KGSPYPRSYY KCSSVRGCPA RKHVERCLED PTMLVVTYEG DHQHPKITFQ APTVVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	214	RIKRRIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	2e-51	WRKY family protein