PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g917050.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 29049.7 Da PI: 8.2056 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.2 | 6.1e-27 | 93 | 153 | 1 | 59 |
---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k+++ pr+Y++C+ a +Cpvkkkv+r+ d++v++ tYegeHnh+ Pd.00g917050.m01 93 VKDGYQWRKYGQKVTKDNPsSPRAYFKCSLApRCPVKKKVQRCMVDKSVLVATYEGEHNHD 153 58**************997369*******999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MISSCPVALE ILMNMDAHTS TKRKVDDLQQ DFLRLRKENE TLRFLLQAMS TKCNTLEQLM 60 REKNIERHDQ FPVAQKTTQF LVRTDSKDNT LIVKDGYQWR KYGQKVTKDN PSSPRAYFKC 120 SLAPRCPVKK KVQRCMVDKS VLVATYEGEH NHDAINGSPL GLFCSNINNN DVINIVSPSN 180 SSRPVPITLD LTLSGSTSNQ ENNGSAGSPQ NSSSCAQNIN CESRIEDYVA YLTRDHNFTQ 240 ALAAAVASSI TRPSADTENQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-37 | WRKY family protein |