PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g915700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 491aa MW: 53435.1 Da PI: 8.3309

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g915700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.8	9e-16	105	197	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W++ + +L+ea +e+ ++l+rg+l++ +Weev++ + + ++ +qCk+k++nl+kryk + ++ + s++ +f++l Pd.00g915700.m01 105 EWSDTAIACLLEAFTEKFNQLNRGNLRGRDWEEVAEMVsercgtggGNKSTYKTVEQCKNKIDNLKKRYKVELQRITSS-GLGASHWHWFKKL 196 5***********************************999999998888999*************999998884.788889***99 PP trihelix 86 e 86 e Pd.00g915700.m01 197 E 197 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MASSDDFPLI DSSSHLHAPP RPRDTVDSTT TANNGDFFPR PFPDDLDRSP NQTRTPNTKR 60 SSYYYKKLKP SSANPNPTTS TTEAESSSGQ ETASQRGDYR KDREEWSDTA IACLLEAFTE 120 KFNQLNRGNL RGRDWEEVAE MVSERCGTGG GNKSTYKTVE QCKNKIDNLK KRYKVELQRI 180 TSSGLGASHW HWFKKLEVIL GSSLVPKGGG GSDEERSGGR ANSNLAKQPK RYTPGSTGFT 240 NNLKSKSMPN VKWKRVMLKI SGAALAGDCQ SIDPKVATQI AEEVARACRL GVEVAIVVGG 300 CNFFCGDTWV SSTGLDRSTA YQIGMMATVM NSILLQSALE KVGVQARVQT ALTMPEVSEP 360 YNRLRAIRHL EKGRVVIFGG IGAGTGNYLF TTDIAAALRA SELNAEAVLK GTNFNGIYEC 420 HSGSNSVTVD HTCYREVVSR GITSVDIMAL TYCEENGIPV VIFNLLEPGN ISRALCGDQV 480 GTLIDQAGRI G

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MASSDDFPLI DSSSHLHAPP RPRDTVDSTT TANNGDFFPR PFPDDLDRSP NQTRTPNTKR  60
SSYYYKKLKP SSANPNPTTS TTEAESSSGQ ETASQRGDYR KDREEWSDTA IACLLEAFTE  120
KFNQLNRGNL RGRDWEEVAE MVSERCGTGG GNKSTYKTVE QCKNKIDNLK KRYKVELQRI  180
TSSGLGASHW HWFKKLEVIL GSSLVPKGGG GSDEERSGGR ANSNLAKQPK RYTPGSTGFT  240
NNLKSKSMPN VKWKRVMLKI SGAALAGDCQ SIDPKVATQI AEEVARACRL GVEVAIVVGG  300
CNFFCGDTWV SSTGLDRSTA YQIGMMATVM NSILLQSALE KVGVQARVQT ALTMPEVSEP  360
YNRLRAIRHL EKGRVVIFGG IGAGTGNYLF TTDIAAALRA SELNAEAVLK GTNFNGIYEC  420
HSGSNSVTVD HTCYREVVSR GITSVDIMAL TYCEENGIPV VIFNLLEPGN ISRALCGDQV  480
GTLIDQAGRI G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-175	Trihelix family protein