PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g914670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 709aa MW: 78346.1 Da PI: 6.7224 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.3 | 7.4e-20 | 24 | 79 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++ Le +F+++++p++++r +L+++lgL rq+k+WFqNrR+++k Pd.00g914670.m01 24 KKRYHRHTANQIQKLEGMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 79 678899***********************************************998 PP | |||||||
2 | START | 180.8 | 7.8e-57 | 223 | 447 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddke...qWdetlakaet 81 +a a++el+++ + +ep+W ks+ + +n++ + ++f+++++ ++ea+r++gvv+m+ lve ++d ++ + + + a+t Pd.00g914670.m01 223 IAANAMEELLRLLQTNEPLWIKSAtdgrDVLNRESYERIFPRANShlkipnLRIEASRDFGVVIMNGLALVEMFMDPNKfgeLFPTIVSMAKT 315 67889*************************************999*********************************77777777777**** PP EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167 +evissg g lqlm+ elq+lsplv R+f+f+Ry++q ++g w+ivdvS d +++++ + R+++lpSg+li++++ng+skv wv Pd.00g914670.m01 316 IEVISSGmlgsqsGSLQLMYKELQVLSPLVQtREFYFLRYCQQIEQGLWAIVDVSYDFPRDNQ-FTNQCRSHRLPSGCLIQDMPNGYSKVSWV 407 **************************************************************9.7999************************* PP E-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 168 ehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206 ehv+ +++ p h l+r l++sgl++ga +w+a+lqr ce+ Pd.00g914670.m01 408 EHVEIEDKAPtHRLYRDLIHSGLPFGAERWLAALQRMCER 447 **************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MEFGSGGGAG SGGDHDASDS QRRKKRYHRH TANQIQKLEG MFKECPHPDE KQRLQLSREL 60 GLAPRQIKFW FQNRRTQMKA QHERADNSAL RAENDKIRCE NIAIREALKN VICPACGVPP 120 LNEDSYFDEH KLRMENAQLK EELDRVSSIA AKCIGRPISQ LPPVQPIHVS SLELSMASFG 180 GHGVGGPSLD LDLLPGTTSS TMPSLPYHPT VLSDMDKSLM TDIAANAMEE LLRLLQTNEP 240 LWIKSATDGR DVLNRESYER IFPRANSHLK IPNLRIEASR DFGVVIMNGL ALVEMFMDPN 300 KFGELFPTIV SMAKTIEVIS SGMLGSQSGS LQLMYKELQV LSPLVQTREF YFLRYCQQIE 360 QGLWAIVDVS YDFPRDNQFT NQCRSHRLPS GCLIQDMPNG YSKVSWVEHV EIEDKAPTHR 420 LYRDLIHSGL PFGAERWLAA LQRMCERFAC LMVSGTSTRD LEGVIPSPEG KRSMMKLAQR 480 MVNNFCASIS TSNGHRWTTL SGMNEVGVRV TIHKSTDPGQ PNGVVLSAAT TIWLPVSPQN 540 VFNFFKDERT RPQWDVLSNN NAVQEVAHIA NGSHPGNCIS VLRAFNTSQN NMLMLQESCI 600 DSSGSLVVYS PVDLPSINIA MSGEDPSYIP LLPSGFTISP DGRPEQGDGA STSSCNVHGS 660 GGSLVTVAFQ ILVSSLPSAM LNLESVNTVN TLIGTTVQQI KAALNCNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | HD-ZIP family protein |