PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g913950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 304aa MW: 34373 Da PI: 9.1771 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.6 | 4.7e-16 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a+++a++ l+g Pd.00g913950.m01 42 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDKAARLLRG 91 577******.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MDSLDSTKVP ADDQFQTQTF QENKERISAM RKVNSNNISG KRFLGVRQRP SGRWVAEIKD 60 SSQKLRLWLG TFDRAEEAAL AYDKAARLLR GRNAKTNFPC HIMNTHEENC SILRKNPRLY 120 QLLQHAIMKN HAIARSSSTK INPWDRNQLR GIDFDTLVEE TIVCSSSGNT SGQDHDDHED 180 RNKLCALSFG SCKVYSSVVV APSFSASSQT QCQQEHEEKV ISVLTVLAFL SCVLGRKLSR 240 DQTVLRPLES INHGHRISCA GWLKRKFRQL QCMVSHHDLE VGPNLKVIVD PKVKQGEEVP 300 PPQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 2e-16 | ERF family protein |