PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g912820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 536aa MW: 57534.1 Da PI: 7.5014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g912820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.9	8.8e-09	347	394	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g912820.m01 347 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 394 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQSDP FESALSSIVS 60 SPAATNAAIA AGKGGSNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS 120 SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ 180 VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG 240 RFSRSSTPEN AELGDSREGS SVSEQIPGGD MSVKAENVTN SRKRKPVARG KAKETSSSPS 300 VKDGKPSGGS KATGDGAQKQ TKDNSEPPEA PKDYIHVRAR RGQATDSHSL AERVRREKIS 360 ERMKFLQDLV PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLSTVNPR MDLNMEALLS 420 KEILQSRGSL QNALYQLDSA IPSFPFGYQP QQLPPLHSSS ISSGTETQFP ESPLNAAMRQ 480 SQGMQLPTFD RFGGAAPQAP QFFEDDLQSV VQMGFGQIQQ ESLHGSMISA QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQSDP FESALSSIVS  60
SPAATNAAIA AGKGGSNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS  120
SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ  180
VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG  240
RFSRSSTPEN AELGDSREGS SVSEQIPGGD MSVKAENVTN SRKRKPVARG KAKETSSSPS  300
VKDGKPSGGS KATGDGAQKQ TKDNSEPPEA PKDYIHVRAR RGQATDSHSL AERVRREKIS  360
ERMKFLQDLV PGCNKVTGKA VMLDEIINYV QSLQRQVEFL SMKLSTVNPR MDLNMEALLS  420
KEILQSRGSL QNALYQLDSA IPSFPFGYQP QQLPPLHSSS ISSGTETQFP ESPLNAAMRQ  480
SQGMQLPTFD RFGGAAPQAP QFFEDDLQSV VQMGFGQIQQ ESLHGSMISA QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-86	bHLH family protein