PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g910560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 655aa    MW: 73961.4 Da    PI: 5.8361
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g910560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.62.2e-1102946521374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d +  ++lL+++++++sp gd+mqRla+yf+ +L+ar+a+ ++ +++ l ++++s    +++l+a++l+ +++P+ k+
  Pd.00g910560.m01 294 LRTLLTHCAQAVAANDERTGNELLKQIRQHSSPMGDAMQRLAHYFADGLEARMAGYGTPICRDLITKPAS---AADVLKAYNLYLDACPFKKL 383
                       6789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++ +e+++r+HiiDf+i +G+QWp+L++ L+sRp+gpp+lRiTg++ p++g   +e++eetg+rLa++Ae+ +vpfefn+ +a+
  Pd.00g910560.m01 384 SNLFSNKTIMNVAEKATRLHIIDFGIHYGFQWPSLIRNLSSRPGGPPKLRITGIDLPQPGfrPAEMVEETGRRLANYAETNKVPFEFNA-IAQ 475
                       ***********************************************************9*9***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++++++e+L+++++E+l+Vn+v++l rllde+v +es+rd vLkl+++++P+v++++  + +++++ Fl+rf eal ++s++fd+le+++p+
  Pd.00g910560.m01 476 TWDTIQIEDLKIDRDEVLVVNSVHRLRRLLDETVMVESPRDMVLKLIRKINPDVFTLAIVNGSYSAPFFLTRFREALFHFSTMFDMLETNAPH 568
                       ******************************************************************************************988 PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++ e     r+        ++aceg+er+er et+++W+ r  +aGF+++pl+++++k ak  l+ ++ + + ++e+s++l+lgWk+r  +++
  Pd.00g910560.m01 569 DAPE-----RM--------LIACEGSERIERPETYKQWQVRNLRAGFTQLPLNQEIVKIAKDRLQSCYHKDFVIDEDSQWLLLGWKGRIGYAL 648
                       8775.....55........79***********************************************889********************** PP

              GRAS 371 SaWr 374
                       S+Wr
  Pd.00g910560.m01 649 SSWR 652
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    
MYPDEDSPEE SDFSDVVLEY ISQMLMEEDM EEKTAMYQES AALHAAEQSY YELLQENFSS  60
PPCDLIHYAD HNHESHPLHC SYNSTICGSA RSIRDCDLPE YKSLHVASQS TSLPFHAPSN  120
ETGNVVDGFA DSLVSILRDP EFSNESELVM QFKRGFEEAS RFLPNANSLN VDFESNTLSL  180
KEGKAEAIGM VVKVDKKNEN SSDGSRGKKN PYHEDVSLER GKSNKLSAVY TESTVSSEMF  240
DRHLLNCGQG ESALRETLQN RTIKIVQQNG QSKGSSGGKD RGKRQGGKKD VVDLRTLLTH  300
CAQAVAANDE RTGNELLKQI RQHSSPMGDA MQRLAHYFAD GLEARMAGYG TPICRDLITK  360
PASAADVLKA YNLYLDACPF KKLSNLFSNK TIMNVAEKAT RLHIIDFGIH YGFQWPSLIR  420
NLSSRPGGPP KLRITGIDLP QPGFRPAEMV EETGRRLANY AETNKVPFEF NAIAQTWDTI  480
QIEDLKIDRD EVLVVNSVHR LRRLLDETVM VESPRDMVLK LIRKINPDVF TLAIVNGSYS  540
APFFLTRFRE ALFHFSTMFD MLETNAPHDA PERMLIACEG SERIERPETY KQWQVRNLRA  600
GFTQLPLNQE IVKIAKDRLQ SCYHKDFVID EDSQWLLLGW KGRIGYALSS WRAAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein