PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g907480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 340aa    MW: 38526.2 Da    PI: 7.2133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g907480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.4e-07127156231
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkas 31 
                        ++h + E  RR+++N ++  Lr+l+P+++
  Pd.00g907480.m01 127 ETNHYATEMHRRAQLNGKYKALRDLVPNPT 156
                       689*************************84 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MHGWDCRLLS LILSAHECTN TDQNNNSSHL LSFEQQTNWD TAGGVDAPPR TVSSVFYDPL  60
LHLNLPPQPP LHRELYQSLF SSGGDEREGI GGVVYSDGIN NGRQFENGVL EFSREMGSIG  120
RGRDVKETNH YATEMHRRAQ LNGKYKALRD LVPNPTKELL WIVEELKIWL VEKKRCGRER  180
HQTEQDGGAG DGESCKPLGD PQDQSYNNGS LRSSWLQRKY KDTEVDIRII DDEVSIKLVQ  240
TKKINSLLYV SKLLDELQLD LHHAEELESH VAKLEVEIGN FKKLLEKTLP NGISSKENIE  300
APKNHGTTNL ARMMSRSNIH SKEGCRSKRR QSAHKLKGQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-40bHLH family protein