PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g907450.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 363aa    MW: 40077.1 Da    PI: 8.0972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g907450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12162208354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h + E+ RR ++N ++  Lr llP++     +K + a+i+ +A++YIk+L
  Pd.00g907450.m01 162 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 208
                       78**************************.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MQQQLQDGAN GAYPPTPDLL NLFSLPRCSP SSVLQNSSIT FTNPNPKSSN FPNSLGFLGD  60
VHGGIDTPPG TASSVLYDPL FHLNLPPQPP LFRELLQSLP HGYSLPGSRN GSLFTSGGDE  120
GEGIGGGVYS DGINNGRQFE NGVLEFSREM GSIGRGRDVK GTKHFATEKH RRVQLNGKYT  180
ALRNLLPHPT KSDRASIVGE AIDYIKELLR TVEELKLLVE KKRCGRERSK RRRTEQDGGA  240
GDDESCNMKP LGDPHDQYGS LRSSWLQRKS KDTEVDIRII DDEVTIKLVQ RKKINLLLYV  300
SKLLDELQLD LHHVAGGHIG NSYSFLFNTK MYEGSSLYAS AIAQKLIEVL DKQYAAVPPT  360
NSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.14e-85bHLH family protein