PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g907450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 363aa MW: 40077.1 Da PI: 8.0972 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.5 | 2e-12 | 162 | 208 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g907450.m01 162 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 208 78**************************.....9****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MQQQLQDGAN GAYPPTPDLL NLFSLPRCSP SSVLQNSSIT FTNPNPKSSN FPNSLGFLGD 60 VHGGIDTPPG TASSVLYDPL FHLNLPPQPP LFRELLQSLP HGYSLPGSRN GSLFTSGGDE 120 GEGIGGGVYS DGINNGRQFE NGVLEFSREM GSIGRGRDVK GTKHFATEKH RRVQLNGKYT 180 ALRNLLPHPT KSDRASIVGE AIDYIKELLR TVEELKLLVE KKRCGRERSK RRRTEQDGGA 240 GDDESCNMKP LGDPHDQYGS LRSSWLQRKS KDTEVDIRII DDEVTIKLVQ RKKINLLLYV 300 SKLLDELQLD LHHVAGGHIG NSYSFLFNTK MYEGSSLYAS AIAQKLIEVL DKQYAAVPPT 360 NSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 4e-85 | bHLH family protein |