PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g904850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 299aa MW: 33686.8 Da PI: 8.6561

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g904850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.5e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+ v+++G g+W + +++ g+ R++k+c++rw++yl Pd.00g904850.m01 15 KGPWTPAEDQKLLAHVQKHGHGNWQSLPQRAGLQRCGKSCRLRWRNYL 62 79*********************************************7 PP
2	Myb_DNA-binding	47.5	4e-15	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +Ed+ +++++++lG++ W++I ++++ +Rt++++k++w++ Pd.00g904850.m01 68 RGNFSLQEDQTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 111 89******************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MEKSTNCVAT SGMKKGPWTP AEDQKLLAHV QKHGHGNWQS LPQRAGLQRC GKSCRLRWRN 60 YLRPDIKRGN FSLQEDQTII QLHALLGNRW SAITAHLPKR TDNEVKNYWH SRLKKRLALK 120 GYDPVTHKPK NTIFGFANGS TDDPKTGSNL NHIAQWESVR LQAEAIYVRD SELHKQAYHP 180 YNNNDIFATS SILSCYNKDF GPTDQLFGQN APQCLDILRA SEIILMSNYS KATCGQDHVN 240 SFGNRLAGDF EPLVISAISN NGSSLMDCFV HEPVGQSFDE NYGTSITEPF ATVHHNMGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	5e-83	MYB family protein