PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g902390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 1070aa MW: 119116 Da PI: 8.4408

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g902390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.4	4.9e-20	927	976	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r +r++lg+f taeeAa+a+++a+ +++g Pd.00g902390.m01 927 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEEAARAYDKAAIEFRG 976 8******.******82....48*********************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1070 aa Download sequence
MGFYFRVLNT LSSSSPSILS FVRHKHYSIT AKTTHFLRLL NLCKTSKDLK PLKSFLIVHG 60 LVNDVFPIEQ FVRSCFHLGA SHLALSLFQQ IQRPSLGLQN LIIRCLCNDG LYQDLLYVYL 120 NSRALGCPSD DFTFPFVIKA CAALGAFKIG KQVHGVVFRA GFEQNLFIQT ALTDFYARTG 180 CMEMARALID RIPQPDLVPW NALIAGYSSN GFNWEAFDVF REIIFMDLKP NLSTLASIIP 240 VCTRLECIHT GKSLHCFAVK SGYLFNDFLV PALISMYAGD EDLCGARNLF DSVLEKKVVV 300 WNAMISAYTQ RQKAMSAFKM FRCMLRVGTQ PNLITFVSVI PSCENSISLA FGESLHAGVI 360 KHGSENQLSI LTALVSMYAK LGNINSSRYL FEQTPSKNLL MWNSMISGYV YNGLWDLSLD 420 VFRKMQFSGF DSDAVSIVSI LSACSKLEAD LLGRSAHAFS IRKGSHSNLN LSNALLAFYS 480 GCHHLSYAVT LFHKMPIRNA ITWNTLISSC VHRGEMEKAV PIYHQMQKEG FKLDLVTLIS 540 ILPSFSEKEN LGQGMAIHGY AIKDGFSSDI SMVNSLISMY CNCGDLDAGR LLFEVLPKRS 600 LVSWNALMTG FRYHNLQKKV LVLLGEMMKS GERSNSVTLL NLLGACYTQL QGKSIHSVAV 660 ISGIVQETPL LTSLMFMYAR FDNTNSCLLL FQMGNMRDIS LWNAIISVHI RTKNSKIAVA 720 SFSDLLQMGF EPDNVTVLSL ISACVQLSSL SLAHSVMAYI IRKGFDKDLL ISNALIDLHA 780 KCGNILVARK LFDDNSRSHV MLHNIYAATG RWAEAERRIT PKKEQLDKNA LARQSHTAGA 840 GALHHGLRPQ AFHSATSSVP STRDGTQSAT DQVHMLSFSA EGDTCRVCGI EGCLGCDYFP 900 STTLPDRNKQ LNLGSGANAG TRKGKNKYRG VRQRPWGKWA AEIRDPRRAA RVWLGTFETA 960 EEAARAYDKA AIEFRGDKAK LNFSLTSSDE HSNITNSNIT SSSRTRTSSQ LIRSMEEADQ 1020 DKVNPITVKQ SEKIEIYESS APQEENDQFL WDMLQDGDDD DELKAWMSAN

Sequence ? help Back to Top

Protein Sequence Length: 1070 aa Download sequence

MGFYFRVLNT LSSSSPSILS FVRHKHYSIT AKTTHFLRLL NLCKTSKDLK PLKSFLIVHG  60
LVNDVFPIEQ FVRSCFHLGA SHLALSLFQQ IQRPSLGLQN LIIRCLCNDG LYQDLLYVYL  120
NSRALGCPSD DFTFPFVIKA CAALGAFKIG KQVHGVVFRA GFEQNLFIQT ALTDFYARTG  180
CMEMARALID RIPQPDLVPW NALIAGYSSN GFNWEAFDVF REIIFMDLKP NLSTLASIIP  240
VCTRLECIHT GKSLHCFAVK SGYLFNDFLV PALISMYAGD EDLCGARNLF DSVLEKKVVV  300
WNAMISAYTQ RQKAMSAFKM FRCMLRVGTQ PNLITFVSVI PSCENSISLA FGESLHAGVI  360
KHGSENQLSI LTALVSMYAK LGNINSSRYL FEQTPSKNLL MWNSMISGYV YNGLWDLSLD  420
VFRKMQFSGF DSDAVSIVSI LSACSKLEAD LLGRSAHAFS IRKGSHSNLN LSNALLAFYS  480
GCHHLSYAVT LFHKMPIRNA ITWNTLISSC VHRGEMEKAV PIYHQMQKEG FKLDLVTLIS  540
ILPSFSEKEN LGQGMAIHGY AIKDGFSSDI SMVNSLISMY CNCGDLDAGR LLFEVLPKRS  600
LVSWNALMTG FRYHNLQKKV LVLLGEMMKS GERSNSVTLL NLLGACYTQL QGKSIHSVAV  660
ISGIVQETPL LTSLMFMYAR FDNTNSCLLL FQMGNMRDIS LWNAIISVHI RTKNSKIAVA  720
SFSDLLQMGF EPDNVTVLSL ISACVQLSSL SLAHSVMAYI IRKGFDKDLL ISNALIDLHA  780
KCGNILVARK LFDDNSRSHV MLHNIYAATG RWAEAERRIT PKKEQLDKNA LARQSHTAGA  840
GALHHGLRPQ AFHSATSSVP STRDGTQSAT DQVHMLSFSA EGDTCRVCGI EGCLGCDYFP  900
STTLPDRNKQ LNLGSGANAG TRKGKNKYRG VRQRPWGKWA AEIRDPRRAA RVWLGTFETA  960
EEAARAYDKA AIEFRGDKAK LNFSLTSSDE HSNITNSNIT SSSRTRTSSQ LIRSMEEADQ  1020
DKVNPITVKQ SEKIEIYESS APQEENDQFL WDMLQDGDDD DELKAWMSAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34410.1	8e-27	ERF family protein