PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g902360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22286.6 Da PI: 6.7741 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5e-21 | 79 | 128 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp +r +r++lg+f taeeAa+a+++a+ +++g Pd.00g902360.m01 79 KYRGVRRRP-WGKWAAEIRDP----QRaARVWLGTFETAEEAARAYDKAAIEFRG 128 8********.**********9....258***********************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MGAVHSATSS VPSTRDGTQS ATDQVHMLSF SAEGDTCRVC GIEGCLGCDY FPSTTLPDRN 60 KQLNLGSGAN AGTRKGKNKY RGVRRRPWGK WAAEIRDPQR AARVWLGTFE TAEEAARAYD 120 KAAIEFRGDK AKLNFSLTSS DEHNNITSSS RTRTSSQLIR SMEEADQDKV NPITVKQSEK 180 IEIYESSAPQ EENDQFLWDM L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 4e-27 | ERF family protein |