PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g898830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 440aa MW: 48469.2 Da PI: 5.7264

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g898830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.8e-10	249	296	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g898830.m01 249 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 296 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNRASPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHQ HEHNDPIQLH QQQQGYNFSG 60 NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAEFE 120 EMINGHNNNS NISRTFSCPT VAAEKKSNDA VLSQKISSPP GKESFKKRKA DKVQSNKAVA 180 AEDDSTEKRM KGCAEEGDSK ITEQTSTKNN TNNDRESSGD TSKDNSKASE VQKPDYIHVR 240 ARRGQATDSH SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE 300 FLSMKLAAVN PRLDFNIDDL FAKEMFPACA ANFQTIGMSS EMTNSAYVQF NPVQQMVSSC 360 GLDMGINSSD LALRRAISAP VSIPETFIDT SCFTQAPPTA IWDADLQNLF NVELQQGRTT 420 PFQSQPFTGS IEASNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNRASPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHQ HEHNDPIQLH QQQQGYNFSG  60
NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAEFE  120
EMINGHNNNS NISRTFSCPT VAAEKKSNDA VLSQKISSPP GKESFKKRKA DKVQSNKAVA  180
AEDDSTEKRM KGCAEEGDSK ITEQTSTKNN TNNDRESSGD TSKDNSKASE VQKPDYIHVR  240
ARRGQATDSH SLAERVRREK ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE  300
FLSMKLAAVN PRLDFNIDDL FAKEMFPACA ANFQTIGMSS EMTNSAYVQF NPVQQMVSSC  360
GLDMGINSSD LALRRAISAP VSIPETFIDT SCFTQAPPTA IWDADLQNLF NVELQQGRTT  420
PFQSQPFTGS IEASNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	4e-69	bHLH family protein