PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g898510.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 730aa MW: 80596.3 Da PI: 4.7299

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g898510.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.4e-07	587	630	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g898510.m02 587 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 630 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 730 aa Download sequence
MEDLDDIFLD PSNAPARPGG RFRPKAKPRP SKVASTAATS ALPNDRTEKP ATLSPTVSDT 60 VPSVKSIDVG DVKVTDHVGS SLATSEILGN IEPAKNNENL CTNVASSDGN KDTKPCESVA 120 TAAPQPEVAA SVGTAAGENA DIFSGLECLD GFLGQTTRGT ESAASKSHVS AESSAFMVCD 180 VAVAQTFSDC CTTQDPVSCR EVSVSNKPEE VQLETKVDGA FSEFEVLDVV SDATILSGQR 240 VGKFQPKLKV KKGKEHLHIP PAEVECMLSQ AVLVPSETDM NESSLPAFPP GNVVDHPSPR 300 FGDSSNPHPT SDPLVNTEYI AETIHSDGAI FGDAVHSEDV GGTPGKEGHK SRNRKGSTAS 360 NRSQKRKSFA ASEEAEGGTS SRKLRKRLPR QEVEELVHEA NEDSFTAEPS SGSNVNEDEN 420 NDNEYREHKT SQRKRAPRKS KEPESGKEEP VQKRKRAKEA PDKSTKDPPK RFSHSTRRTK 480 RHVDKSLLEI PEDEIDHQSL SLKNLIRLAE HRELLAIKEA RKMTTPVPDE SANNDSHKEA 540 YHNEENEEET FPSEQDRNSE ENQASYRVNA SSFLLNYQSY MDKTPTVRWS KQDTELFYGA 600 IQQCGSDFTM IQELYFPGRT RHQIKLKFKK EERQNPLRIN EAVLSRSTCS TDHSQFTSYI 660 ERLQQVAQAN KEEEAEPTHD TDEGVKKTEL EEPEYQEADV AEVQEEAVDA EVDNPLKSDE 720 IDDEEFTWSE

Sequence ? help Back to Top

Protein Sequence Length: 730 aa Download sequence

MEDLDDIFLD PSNAPARPGG RFRPKAKPRP SKVASTAATS ALPNDRTEKP ATLSPTVSDT  60
VPSVKSIDVG DVKVTDHVGS SLATSEILGN IEPAKNNENL CTNVASSDGN KDTKPCESVA  120
TAAPQPEVAA SVGTAAGENA DIFSGLECLD GFLGQTTRGT ESAASKSHVS AESSAFMVCD  180
VAVAQTFSDC CTTQDPVSCR EVSVSNKPEE VQLETKVDGA FSEFEVLDVV SDATILSGQR  240
VGKFQPKLKV KKGKEHLHIP PAEVECMLSQ AVLVPSETDM NESSLPAFPP GNVVDHPSPR  300
FGDSSNPHPT SDPLVNTEYI AETIHSDGAI FGDAVHSEDV GGTPGKEGHK SRNRKGSTAS  360
NRSQKRKSFA ASEEAEGGTS SRKLRKRLPR QEVEELVHEA NEDSFTAEPS SGSNVNEDEN  420
NDNEYREHKT SQRKRAPRKS KEPESGKEEP VQKRKRAKEA PDKSTKDPPK RFSHSTRRTK  480
RHVDKSLLEI PEDEIDHQSL SLKNLIRLAE HRELLAIKEA RKMTTPVPDE SANNDSHKEA  540
YHNEENEEET FPSEQDRNSE ENQASYRVNA SSFLLNYQSY MDKTPTVRWS KQDTELFYGA  600
IQQCGSDFTM IQELYFPGRT RHQIKLKFKK EERQNPLRIN EAVLSRSTCS TDHSQFTSYI  660
ERLQQVAQAN KEEEAEPTHD TDEGVKKTEL EEPEYQEADV AEVQEEAVDA EVDNPLKSDE  720
IDDEEFTWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	1e-43	MYB_related family protein