PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g898510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 731aa MW: 80667.4 Da PI: 4.7299

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g898510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.4e-07	588	631	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g898510.m01 588 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 631 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MEDLDDIFLD PSNAPARPGG RFRPKAKPRP SKVASTAATS ALPNDRTEKP ATLSPTVSDT 60 VPSVKSIDVG DVKVTDHVGS SLATSEILGN IEPAKNNENL CTNVASSDGN KDTKPCESVA 120 TAAPQPEVAA SVGTAAGENA DIFSGLECLD GFLGQTTRGT AESAASKSHV SAESSAFMVC 180 DVAVAQTFSD CCTTQDPVSC REVSVSNKPE EVQLETKVDG AFSEFEVLDV VSDATILSGQ 240 RVGKFQPKLK VKKGKEHLHI PPAEVECMLS QAVLVPSETD MNESSLPAFP PGNVVDHPSP 300 RFGDSSNPHP TSDPLVNTEY IAETIHSDGA IFGDAVHSED VGGTPGKEGH KSRNRKGSTA 360 SNRSQKRKSF AASEEAEGGT SSRKLRKRLP RQEVEELVHE ANEDSFTAEP SSGSNVNEDE 420 NNDNEYREHK TSQRKRAPRK SKEPESGKEE PVQKRKRAKE APDKSTKDPP KRFSHSTRRT 480 KRHVDKSLLE IPEDEIDHQS LSLKNLIRLA EHRELLAIKE ARKMTTPVPD ESANNDSHKE 540 AYHNEENEEE TFPSEQDRNS EENQASYRVN ASSFLLNYQS YMDKTPTVRW SKQDTELFYG 600 AIQQCGSDFT MIQELYFPGR TRHQIKLKFK KEERQNPLRI NEAVLSRSTC STDHSQFTSY 660 IERLQQVAQA NKEEEAEPTH DTDEGVKKTE LEEPEYQEAD VAEVQEEAVD AEVDNPLKSD 720 EIDDEEFTWS E

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MEDLDDIFLD PSNAPARPGG RFRPKAKPRP SKVASTAATS ALPNDRTEKP ATLSPTVSDT  60
VPSVKSIDVG DVKVTDHVGS SLATSEILGN IEPAKNNENL CTNVASSDGN KDTKPCESVA  120
TAAPQPEVAA SVGTAAGENA DIFSGLECLD GFLGQTTRGT AESAASKSHV SAESSAFMVC  180
DVAVAQTFSD CCTTQDPVSC REVSVSNKPE EVQLETKVDG AFSEFEVLDV VSDATILSGQ  240
RVGKFQPKLK VKKGKEHLHI PPAEVECMLS QAVLVPSETD MNESSLPAFP PGNVVDHPSP  300
RFGDSSNPHP TSDPLVNTEY IAETIHSDGA IFGDAVHSED VGGTPGKEGH KSRNRKGSTA  360
SNRSQKRKSF AASEEAEGGT SSRKLRKRLP RQEVEELVHE ANEDSFTAEP SSGSNVNEDE  420
NNDNEYREHK TSQRKRAPRK SKEPESGKEE PVQKRKRAKE APDKSTKDPP KRFSHSTRRT  480
KRHVDKSLLE IPEDEIDHQS LSLKNLIRLA EHRELLAIKE ARKMTTPVPD ESANNDSHKE  540
AYHNEENEEE TFPSEQDRNS EENQASYRVN ASSFLLNYQS YMDKTPTVRW SKQDTELFYG  600
AIQQCGSDFT MIQELYFPGR TRHQIKLKFK KEERQNPLRI NEAVLSRSTC STDHSQFTSY  660
IERLQQVAQA NKEEEAEPTH DTDEGVKKTE LEEPEYQEAD VAEVQEEAVD AEVDNPLKSD  720
EIDDEEFTWS E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	1e-43	MYB_related family protein