PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g895940.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 434aa MW: 47834.6 Da PI: 5.7231 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.7 | 5.7e-10 | 243 | 290 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g895940.m01 243 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 290 8**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MLNCTNAPGT FLAGNCTDMT VLERQRARMK WHQHEHNDPI QLHQQQQGYN FSGNELSGVF 60 SVPIPAGQAQ GFMGLVCGDS AVKPDPCLEN RWAELGYGSC GLVVNNNGAA EFEEMINGHN 120 NNSNISRTFS CPPTVAAEKK SNDAVLSQKI SSPPGKESFK KRKAEKVQSN KAVAAEDDST 180 EKRMKGCAEE GDSKITEQTS TKNNTNNDRE SSGDTSKDNS KASEVQKPDY IHVRARRGQA 240 TDSHSLAERV RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ RQVEFLSMKL 300 AAVNPRLDFN IDDLFAKEMF PACTANFQTI GMSSEMTNSA YVQFNPVQQM VSSCGLDMGI 360 NSSDLALRRA ISAPLSIPET FIDTSCFTQA PPTAIWDADL QNLFNVELQQ GRTTPFQSQP 420 FTGSIEASNL KMEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 3e-69 | bHLH family protein |