PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g895940.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 434aa    MW: 47834.6 Da    PI: 5.7231
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g895940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.7e-10243290455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Pd.00g895940.m01 243 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 290
                       8**************************....999*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MLNCTNAPGT FLAGNCTDMT VLERQRARMK WHQHEHNDPI QLHQQQQGYN FSGNELSGVF  60
SVPIPAGQAQ GFMGLVCGDS AVKPDPCLEN RWAELGYGSC GLVVNNNGAA EFEEMINGHN  120
NNSNISRTFS CPPTVAAEKK SNDAVLSQKI SSPPGKESFK KRKAEKVQSN KAVAAEDDST  180
EKRMKGCAEE GDSKITEQTS TKNNTNNDRE SSGDTSKDNS KASEVQKPDY IHVRARRGQA  240
TDSHSLAERV RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ RQVEFLSMKL  300
AAVNPRLDFN IDDLFAKEMF PACTANFQTI GMSSEMTNSA YVQFNPVQQM VSSCGLDMGI  360
NSSDLALRRA ISAPLSIPET FIDTSCFTQA PPTAIWDADL QNLFNVELQQ GRTTPFQSQP  420
FTGSIEASNL KMEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.13e-69bHLH family protein