PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g895640.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 703aa MW: 77438.6 Da PI: 5.411

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g895640.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5.2e-07	625	668	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g895640.m02 625 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 668 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MRDSNPSELL LILRNAQQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN APARPGGRFR 60 PKAKPRPSKV ASTAATSALP NDRTEKPATL SPTVSDTVPS VKSIDVGDVK VTDHVGSSLA 120 TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG TAAGENADIF 180 SGLECLDGFL GQTTRGTAES AASKSHVSAE SSAFMVCDVA EAQTFSDCCT TQDPVSCREV 240 SVSNKPEEVQ LETKVDGAFS EFEVLDVVSD ATILSGQRVG KFQPKLKVKK GKEHLHIPPA 300 EVECMLSQAV LVPSETDMNE SSLPAFPPGH VVDHPSPRFG DSSNPHPTSD PLVNTEHIAE 360 TIHSDGAIFG DAVHSEDVGG TPGKEGHKSR YRKGSTASNR SQKRKSFAAS EEAEGGTSSR 420 KLRKRLPRQE VEELVHEANE DSFTAEPSSG SNVNEDENND NEYREHKTSQ RKRAPRKSKE 480 PESGKEEPVQ KRKRAKEAPD KSTKDPPKRF SHSTRRTKRH VDKSLLEIPE DEIDHQSLSL 540 KNLIRLAEHR ELLAIKEARK MTTPVPDESA NNDSHKEAYH NEENEEETFP SEQDRNSEEN 600 QASYRVNASS FLLNYQSYMD KTPTVRWSKQ DTELFYGAIQ QCGSDFTMIQ ELYFPGRTRH 660 QIKLKFKKEE RQNPLRINEA VLSRSTCSTV FNDDTFIHKT ADL

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MRDSNPSELL LILRNAQQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN APARPGGRFR  60
PKAKPRPSKV ASTAATSALP NDRTEKPATL SPTVSDTVPS VKSIDVGDVK VTDHVGSSLA  120
TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG TAAGENADIF  180
SGLECLDGFL GQTTRGTAES AASKSHVSAE SSAFMVCDVA EAQTFSDCCT TQDPVSCREV  240
SVSNKPEEVQ LETKVDGAFS EFEVLDVVSD ATILSGQRVG KFQPKLKVKK GKEHLHIPPA  300
EVECMLSQAV LVPSETDMNE SSLPAFPPGH VVDHPSPRFG DSSNPHPTSD PLVNTEHIAE  360
TIHSDGAIFG DAVHSEDVGG TPGKEGHKSR YRKGSTASNR SQKRKSFAAS EEAEGGTSSR  420
KLRKRLPRQE VEELVHEANE DSFTAEPSSG SNVNEDENND NEYREHKTSQ RKRAPRKSKE  480
PESGKEEPVQ KRKRAKEAPD KSTKDPPKRF SHSTRRTKRH VDKSLLEIPE DEIDHQSLSL  540
KNLIRLAEHR ELLAIKEARK MTTPVPDESA NNDSHKEAYH NEENEEETFP SEQDRNSEEN  600
QASYRVNASS FLLNYQSYMD KTPTVRWSKQ DTELFYGAIQ QCGSDFTMIQ ELYFPGRTRH  660
QIKLKFKKEE RQNPLRINEA VLSRSTCSTV FNDDTFIHKT ADL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-42	MYB_related family protein