PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g895640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 702aa MW: 77367.5 Da PI: 5.411

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g895640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5.2e-07	624	667	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g895640.m01 624 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 667 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MRDSNPSELL LILRNAQQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN APARPGGRFR 60 PKAKPRPSKV ASTAATSALP NDRTEKPATL SPTVSDTVPS VKSIDVGDVK VTDHVGSSLA 120 TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG TAAGENADIF 180 SGLECLDGFL GQTTRGTESA ASKSHVSAES SAFMVCDVAE AQTFSDCCTT QDPVSCREVS 240 VSNKPEEVQL ETKVDGAFSE FEVLDVVSDA TILSGQRVGK FQPKLKVKKG KEHLHIPPAE 300 VECMLSQAVL VPSETDMNES SLPAFPPGHV VDHPSPRFGD SSNPHPTSDP LVNTEHIAET 360 IHSDGAIFGD AVHSEDVGGT PGKEGHKSRY RKGSTASNRS QKRKSFAASE EAEGGTSSRK 420 LRKRLPRQEV EELVHEANED SFTAEPSSGS NVNEDENNDN EYREHKTSQR KRAPRKSKEP 480 ESGKEEPVQK RKRAKEAPDK STKDPPKRFS HSTRRTKRHV DKSLLEIPED EIDHQSLSLK 540 NLIRLAEHRE LLAIKEARKM TTPVPDESAN NDSHKEAYHN EENEEETFPS EQDRNSEENQ 600 ASYRVNASSF LLNYQSYMDK TPTVRWSKQD TELFYGAIQQ CGSDFTMIQE LYFPGRTRHQ 660 IKLKFKKEER QNPLRINEAV LSRSTCSTVF NDDTFIHKTA DL

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MRDSNPSELL LILRNAQQLA EGFCLIYVET VVEVKLNMED LDDIFLDPSN APARPGGRFR  60
PKAKPRPSKV ASTAATSALP NDRTEKPATL SPTVSDTVPS VKSIDVGDVK VTDHVGSSLA  120
TSEILGNIEP AKNNENLCTN VASSDGNKDT KPCESAATAA PQPEVAASVG TAAGENADIF  180
SGLECLDGFL GQTTRGTESA ASKSHVSAES SAFMVCDVAE AQTFSDCCTT QDPVSCREVS  240
VSNKPEEVQL ETKVDGAFSE FEVLDVVSDA TILSGQRVGK FQPKLKVKKG KEHLHIPPAE  300
VECMLSQAVL VPSETDMNES SLPAFPPGHV VDHPSPRFGD SSNPHPTSDP LVNTEHIAET  360
IHSDGAIFGD AVHSEDVGGT PGKEGHKSRY RKGSTASNRS QKRKSFAASE EAEGGTSSRK  420
LRKRLPRQEV EELVHEANED SFTAEPSSGS NVNEDENNDN EYREHKTSQR KRAPRKSKEP  480
ESGKEEPVQK RKRAKEAPDK STKDPPKRFS HSTRRTKRHV DKSLLEIPED EIDHQSLSLK  540
NLIRLAEHRE LLAIKEARKM TTPVPDESAN NDSHKEAYHN EENEEETFPS EQDRNSEENQ  600
ASYRVNASSF LLNYQSYMDK TPTVRWSKQD TELFYGAIQQ CGSDFTMIQE LYFPGRTRHQ  660
IKLKFKKEER QNPLRINEAV LSRSTCSTVF NDDTFIHKTA DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-42	MYB_related family protein