PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g894830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 283aa MW: 30952.3 Da PI: 8.6634 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58 | 1.2e-18 | 202 | 235 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C++ kTp+WR gp g ktLCnaCG+++++ + Pd.00g894830.m01 202 CSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGR 235 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MGRDLFPSSS TPFPVLSSFI LSEMELCMEA KALKSSLRRE LALKSNQQAL IDEFWCATGI 60 SGVPISVDDE SSNSSNFVSA DSESALASQL LVPDDDLAGL EWVSHFVDDS LLDLSLLHPL 120 GTQKPEALAL TRSEPEAKLV QSTPTWFPSQ VPVKPRTKRC RAASRVCTDV FVGEPATKKQ 180 KKKPAVQTGV DGSVGVQFQR RCSHCHVQKT PQWRTGPLGA KTLCNACGVR FKSGRLFPEY 240 RPACSPTFSG DVHSNSHRKV LEMRKRKEAG GPEPGLNRVI PSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 4e-51 | GATA family protein |