PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g893790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 546aa MW: 59654.7 Da PI: 6.5871

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g893790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94	1.1e-29	313	371	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g893790.m01 313 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGtGCPVRKQVQRCAEDRTILVTTYEGHHNHP 371 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MESAASDHSI HNCRSTEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV 60 KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHNMED KHRTNELAVL 120 QAELGRMNVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHKMINNRSV 180 VVEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPRN DIVESMECCK 240 STSHVLHRDL SGRISTTNGG EDGPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR 300 VSVRARSEAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL 360 VTTYEGHHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL 420 ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MTSVPQILGQ ALSSQSKFSV 480 LDSFQGLDSA THSLADKVNA ATAAITADPN FTAALVAAIT SIVGNVHSNN NTNGNITTRN 540 NSDSNT

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MESAASDHSI HNCRSTEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV  60
KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHNMED KHRTNELAVL  120
QAELGRMNVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHKMINNRSV  180
VVEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPRN DIVESMECCK  240
STSHVLHRDL SGRISTTNGG EDGPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR  300
VSVRARSEAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL  360
VTTYEGHHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL  420
ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MTSVPQILGQ ALSSQSKFSV  480
LDSFQGLDSA THSLADKVNA ATAAITADPN FTAALVAAIT SIVGNVHSNN NTNGNITTRN  540
NSDSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-106	WRKY family protein