PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g893290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25299.1 Da PI: 8.2068 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 8.1e-20 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa++ l+g Pd.00g893290.m01 31 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARILRG 80 69*******.**********883....5***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MRRGRGAAAR AAAATPAVPA GSRPNIAHEV RYRGVRKRPW GRFAAEIRDP WKKTRVWLGT 60 FDSAEDAARA YDAAARILRG PKAKTNFPIS CAYPPPFYNN PTDQAIETKL FGSGYGFQDH 120 PVVDPQRPTS SSLSSTVESF SGPRPPPQST TIAAESSRRK RQPRTPPDVP EDCHSDCDSS 180 SSVVEDDGDF AASSSFRKTL LPFDLNFPPL DEEGELGGGD GQDLRCLMSN ASC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 3e-28 | ERF family protein |