PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g888590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 260aa MW: 29483.8 Da PI: 6.9942 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.2e-17 | 10 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl Pd.00g888590.m01 10 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 58 79*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MTLSKANVKK GPWSPEEDAK LKEYIEKYGT GGNWIALPQK AGLRRCGKSC RLRWLNYLRP 60 NIKHGEFSEE EDRIICNLFT NIGSRWSIIA AQGSNNSTAY YAQTRSFSSA LEPISFSPSL 120 LSRSSTNAAS VLHQVHQERF VGRAMQHNYQ VKDNILMFGG EASCSSSDGS CSNQISQCRD 180 REYEYNYNFF NGGEGHQKIM LPDGLNGWRS EKQNGNGIWE DQAPLDYGLE EIKQLISSTS 240 SCNNFLFDEN KTEEKAMMYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 1e-53 | MYB family protein |