PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g884310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 516aa    MW: 58461.7 Da    PI: 6.0928
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g884310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.71.6e-098442965
          trihelix 29 plWeevskkmrergferspkqCkekwenlnkrykkik 65
                        We+vs+k++e gf+rs+++Ckek+e+ ++ + +i+
  Pd.00g884310.m01  8 FTWEHVSRKLAELGFKRSAEKCKEKFEEESRCFNNIN 44
                      58**************************999998876 PP
2trihelix97.98.6e-31342431186
          trihelix   1 rWtkqevlaLiearremeerlrrgk.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       rW+++evlaLi++r ++ ++ ++++      k+plWe++s+ m e+g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql 
  Pd.00g884310.m01 342 RWPRDEVLALINLRCSLFNNGSADQdkngvVKAPLWERISQGMLEKGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 431
                       8********************9865556669********************************************8.9999********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MDNWFPEFTW EHVSRKLAEL GFKRSAEKCK EKFEEESRCF NNINFTKNYR FLSDLEELCH  60
GGNDDQNPDQ AAAGAENKNQ QKLEKPSNNE GDEDNRCQIL DEDSTRNETV VGSKEFDDHD  120
KEKEVVERTK SNVVRKRKRQ RRFEMLKGFC EDIVNRMMAQ QEEMHSKLLE DMVKRSEEKL  180
AREEAWKKQE MDRMNKELEI MAHEQAIAGD RQATIIKFLK KFASSSSSST SSEPSPDHDH  240
RTNSSCLINQ ARNPNHPTCS QEKEPTSSTI IQKSGTSSHT PNNPSTPISL TETLAPQSPS  300
SSTLAPTPTI PKVSIPPENP SSDNLNTQNP TSNDDKQDLG KRWPRDEVLA LINLRCSLFN  360
NGSADQDKNG VVKAPLWERI SQGMLEKGYK RSAKRCKEKW ENINKYFRKT KDVNKKRSLD  420
SRTCPYFHQL STLYNQGILV PPSDHIQGPD HQTSSASPEN QSLASPVVPQ TGLDSSDQGR  480
CSADADDDLS KHNIIGEGEK NNTVQPVPAA AFDFEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141KRKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.18e-96Trihelix family protein