PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g884090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 307aa    MW: 32934.1 Da    PI: 6.24
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g884090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.3e-10156200554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  Pd.00g884090.m01 156 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 200
                       99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAGNPPEGLG DDFFEQILAV PPSYSTGGAD SAGGGGVGMG IGMPLGLNLE QGGFIGQERF  60
RELRAEVEAN TNNNINTSNV SASVSSAMNE RDSVHMTNLF PAFGHLQNHS LRPTPPPPQP  120
HQFHSQPSPG PVAAVHHPPA IRPRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPS  180
CNKTDRAAML DEIVDYVKFL RLQVKVLSMS RLGGAGAVAQ LVADVPLSAV EGEGIEGGTN  240
QQAWEKWSND GTEQQVAKLM EEDVGAAMQF LQSKALCIMP ISLAPAIFRT HQPDATTLVK  300
PESNSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.33e-61bHLH family protein