PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g883050.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 216aa MW: 24375.4 Da PI: 8.0421 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 71.8 | 7.5e-23 | 83 | 163 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+e++++l++v++ L+ + +++k+R iYDi+NVL+++nliek ++k +++w g Pd.00g883050.m01 83 RREKSLALLTQNFVKLFVCSTEEMISLDDVTELLLGDaqsasAMRTKVRGIYDIANVLSSMNLIEKthtadTRKLAFKWLG 163 689***************************************************************999999999999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MSYLFLHQPK NQYYWKGFGA IRNALQELRE EGLRENCINF VASDDAKVSD DKDDEERCGS 60 QLNDKSNPTV NPQPPADQKT DNRREKSLAL LTQNFVKLFV CSTEEMISLD DVTELLLGDA 120 QSASAMRTKV RGIYDIANVL SSMNLIEKTH TADTRKLAFK WLGLRGKEEN LVPNESRKRA 180 FGTDITNVIS KRSKMDSSIG GKLDAQKQRQ PTQISS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 3e-60 | E2F/DP family protein |