PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g883040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 208aa    MW: 21754.1 Da    PI: 5.0349
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g883040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-182170255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       ++GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a+++a++kl+g
  Pd.00g883040.m01 21 NFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSTEAALAYDEAARKLYG 70
                      69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MGRSRKGCMK GKGGPENALC NFRGVRQRTW GKWVAEIREP NRGARLWLGT FNTSTEAALA  60
YDEAARKLYG TSAKLNLPDH KPPPSSPANS SCSSTKSTSD QYNMKGGFGE SMEGGSSGDG  120
CGKLGGEACS DSLIFAGWSI GDDLWESTTT AGGASASTGT NSPVLSSWAG VCGEKDFLEM  180
NDIGAAVMMG GGDEFINWDA LGPPSSWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.19e-45ERF family protein