PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g882910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 576aa MW: 65808.2 Da PI: 7.7054

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g882910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.6	7e-14	5	51	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 +WT eEd+ll ++++q+G g W++++ gRt++++k++w+ + Pd.00g882910.m01 5 PWTREEDQLLRKCIEQYGEGKWHRVPLLAArlPGRTGNDVKNYWNCH 51 7********************9976666666*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MGGIPWTREE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE 60 AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTGLDQAPS NNFCQPVNLL AQEGGSSSRT 120 QIPTPMPMLC NIGDGQNQMF QAEHDESNKN VPSVEEEDIN DGINMGVSAR FIMAYIPPHK 180 RHSKETEWPL PTPELLAPQF KKKLDLRSSK SNADLDGKVI YANHARSRWC IIGLDDENQF 240 PSSVNLEPIS WETTERRIGE KPLALINTSL DKEGSEVKWY FPKSPWVSIA ENVLEDLLSS 300 FENVKNDMKC PKLEQVKPSL VARVGKVLFQ RSPSVNMESI RNNLDTEILK QWKRLFYTNL 360 PVSYKENILK KVVPNIGVDF EEEKDVYQVK LSDSTRPDSI LSCKCSVMKE HGKLQLHKIE 420 LNQLRDMVID ISCPNKNLDL RVMLSTKRPV TALSDDEMQS IRDLISSAVL DPDVKGGLRW 480 PLGKESSGDR YKVVGIWHVI ANMYTNPSLR LKVRHADRFD FRTSTGEATW EVSLMLKKVL 540 SKLQEEKVEV SSISEILEEN MRMIWDNFLC SEHFLI

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MGGIPWTREE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE  60
AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTGLDQAPS NNFCQPVNLL AQEGGSSSRT  120
QIPTPMPMLC NIGDGQNQMF QAEHDESNKN VPSVEEEDIN DGINMGVSAR FIMAYIPPHK  180
RHSKETEWPL PTPELLAPQF KKKLDLRSSK SNADLDGKVI YANHARSRWC IIGLDDENQF  240
PSSVNLEPIS WETTERRIGE KPLALINTSL DKEGSEVKWY FPKSPWVSIA ENVLEDLLSS  300
FENVKNDMKC PKLEQVKPSL VARVGKVLFQ RSPSVNMESI RNNLDTEILK QWKRLFYTNL  360
PVSYKENILK KVVPNIGVDF EEEKDVYQVK LSDSTRPDSI LSCKCSVMKE HGKLQLHKIE  420
LNQLRDMVID ISCPNKNLDL RVMLSTKRPV TALSDDEMQS IRDLISSAVL DPDVKGGLRW  480
PLGKESSGDR YKVVGIWHVI ANMYTNPSLR LKVRHADRFD FRTSTGEATW EVSLMLKKVL  540
SKLQEEKVEV SSISEILEEN MRMIWDNFLC SEHFLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-17	MYB family protein