PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g882340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 977aa MW: 107796 Da PI: 6.5344

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g882340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.3	5e-31	528	585	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES-.-SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege.Hnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g Hnh Pd.00g882340.m01 528 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSF-DGQITEIIYKGApHNHA 585 7**************************************.********9669996 PP
2	WRKY	102.7	2e-32	746	804	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe Pd.00g882340.m01 746 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHE 804 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 977 aa Download sequence
MTCISLIKQS HTLLSLKTVH ASILRAHLHL NLFLCTNLIA HYASLGSTSH AYTLFSAFSS 60 SSSSSDVFLW NVMIRGFVDN GLYHKAIALY SNMWELGTQP DHFTFPFVLK ACGYVCDDRL 120 GVKLHGDVIQ CGCASDLFVG NSLIGLYGKF GQVETARKVF DKMPDRNVVS WSSMIGAYSQ 180 SGCFKHGWFL FSMMLNESIR PNRAAILNVM ACVSRENQAE EVCGVVAANG LDLDRSVQNA 240 AMQMYARCRR IDVARGFFDK ISDKDLVSWA SMIEAYVQVD LPLEALELFK EMRVQGILPD 300 LVALLSGIIK PTDEESIKMG FLRTMDQEDD AVAENKTKAC GPGANTISIA ERRAAKCGFN 360 AERINTARFR TTSPLPSPAA AASSVLKSGT HEDGHRGSDF GSSFTFKRQG DPKYLPDYSS 420 FENQGSTVDY QSLVLEQQPI DFEFPMEFPE EANAKNYAVD PSTHVKNLNS GILNANCVDL 480 QRSNSSAASE QNSLPKEPIH GEDVGSHPFL EGEHRGSYPS AGMVRTSEDG YNWRKYGQKQ 540 VKGSEYPRSY YKCTHPNCQV KKKVERSFDG QITEIIYKGA PHNHAMPQPN RRAGASLGSS 600 FSFDETSEMS EGSRASVKVE GGSVWTNIQS GQDIKTGYDG RAEGLERTSS TSVVTDLSDP 660 LSTTQGKSMS IFESAETPEF SSTLASHDDD DRGTQGSISL GDDADDEESE SKRRKKESCL 720 IEPSLASRAV REPRVVVQIE SEVDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSAGCSVR 780 KHVERASHNL KFVITTYEGK HNHEVPAARN SNHINSNGGN AHPSTANAQP ALALPRSSNN 840 PKPETQVQDL APHFDRKPDF HEEYLRSSFL GNFNNDLKFG VPSIYQMKYP PLQNTMPYSS 900 FGLHANHNVT HQAGSVVPDF PISLPLNLPP SGNLPLSGFD FNNGKSVCPV QPYFSGQQLQ 960 EDDTRYLGTL DVIYASL

Sequence ? help Back to Top

Protein Sequence Length: 977 aa Download sequence

MTCISLIKQS HTLLSLKTVH ASILRAHLHL NLFLCTNLIA HYASLGSTSH AYTLFSAFSS  60
SSSSSDVFLW NVMIRGFVDN GLYHKAIALY SNMWELGTQP DHFTFPFVLK ACGYVCDDRL  120
GVKLHGDVIQ CGCASDLFVG NSLIGLYGKF GQVETARKVF DKMPDRNVVS WSSMIGAYSQ  180
SGCFKHGWFL FSMMLNESIR PNRAAILNVM ACVSRENQAE EVCGVVAANG LDLDRSVQNA  240
AMQMYARCRR IDVARGFFDK ISDKDLVSWA SMIEAYVQVD LPLEALELFK EMRVQGILPD  300
LVALLSGIIK PTDEESIKMG FLRTMDQEDD AVAENKTKAC GPGANTISIA ERRAAKCGFN  360
AERINTARFR TTSPLPSPAA AASSVLKSGT HEDGHRGSDF GSSFTFKRQG DPKYLPDYSS  420
FENQGSTVDY QSLVLEQQPI DFEFPMEFPE EANAKNYAVD PSTHVKNLNS GILNANCVDL  480
QRSNSSAASE QNSLPKEPIH GEDVGSHPFL EGEHRGSYPS AGMVRTSEDG YNWRKYGQKQ  540
VKGSEYPRSY YKCTHPNCQV KKKVERSFDG QITEIIYKGA PHNHAMPQPN RRAGASLGSS  600
FSFDETSEMS EGSRASVKVE GGSVWTNIQS GQDIKTGYDG RAEGLERTSS TSVVTDLSDP  660
LSTTQGKSMS IFESAETPEF SSTLASHDDD DRGTQGSISL GDDADDEESE SKRRKKESCL  720
IEPSLASRAV REPRVVVQIE SEVDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSAGCSVR  780
KHVERASHNL KFVITTYEGK HNHEVPAARN SNHINSNGGN AHPSTANAQP ALALPRSSNN  840
PKPETQVQDL APHFDRKPDF HEEYLRSSFL GNFNNDLKFG VPSIYQMKYP PLQNTMPYSS  900
FGLHANHNVT HQAGSVVPDF PISLPLNLPP SGNLPLSGFD FNNGKSVCPV QPYFSGQQLQ  960
EDDTRYLGTL DVIYASL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-82	WRKY family protein