PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g882130.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 479aa MW: 52179.8 Da PI: 6.5315

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g882130.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.4	4.9e-15	263	314	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g882130.m02 263 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 314 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MGSMNWLGFS LSPQEVVPAD PSISEGDHHH HHQHHDGHEL SDDQTATLVS RLGFKYSDDI 60 SGTDVSGGCF DLTSHDDSSA TTTAVAVPNN HSHNHLIPPP FGMLHQAAAF NTTNIHSQGA 120 DWSNMNSSDS STYKTTSDHL SMLMGSNNSY RSQNLENHHQ QPKLENFLGR HSFVADEHHI 180 GGQSSSSGTH AYNNNSTSST CTDGQVDMKL ISGIIVAGEK DKLAREGKIS NYEKEIDEMK 240 HMTRQEYVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE 300 AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSSTLPIG GAAKRLKDVE QAAQHQHHEM 360 IISTDHNNGF GDGSNHDHQV KAVALGFENV FGSTTTSANA TNVTGDAYNN HARNLYYLSQ 420 QPPQSSSVSS VSSAGVAKGG SAYDIHEAGQ CNNWMPTAVP TSTNSNINMP PTFTVWNDT

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MGSMNWLGFS LSPQEVVPAD PSISEGDHHH HHQHHDGHEL SDDQTATLVS RLGFKYSDDI  60
SGTDVSGGCF DLTSHDDSSA TTTAVAVPNN HSHNHLIPPP FGMLHQAAAF NTTNIHSQGA  120
DWSNMNSSDS STYKTTSDHL SMLMGSNNSY RSQNLENHHQ QPKLENFLGR HSFVADEHHI  180
GGQSSSSGTH AYNNNSTSST CTDGQVDMKL ISGIIVAGEK DKLAREGKIS NYEKEIDEMK  240
HMTRQEYVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE  300
AAEAYDIAAI KFRGLNAVTN FDMTRYDVKS ILDSSTLPIG GAAKRLKDVE QAAQHQHHEM  360
IISTDHNNGF GDGSNHDHQV KAVALGFENV FGSTTTSANA TNVTGDAYNN HARNLYYLSQ  420
QPPQSSSVSS VSSAGVAKGG SAYDIHEAGQ CNNWMPTAVP TSTNSNINMP PTFTVWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	8e-66	AP2 family protein