PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g881390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 288aa    MW: 32024.7 Da    PI: 7.7741
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g881390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.15.1e-32172228158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RR +Rak e ekkl +k+rkpylheSRh hAlrR+Rg+gGrF
  Pd.00g881390.m01 172 EEPVYVNAKQYHGILRRRLSRAKTELEKKL-IKARKPYLHESRHLHALRRARGCGGRF 228
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MMPAKSKDED PHIEHGAQTV LESAIYAQPW WRGVGNNSSS GESAPASSLV DHRDSMVMNG  60
AMQSQANARL DGGANFNKEL RTTVGSQSDQ KNGCKNQQIK SVSSSVVPTM GEHLDPNSQM  120
ELVGHSIVLT SYPYSDPQYG RMLTPYGAQA MLPPHFYGIH HGRMPLPLEM EEEPVYVNAK  180
QYHGILRRRL SRAKTELEKK LIKARKPYLH ESRHLHALRR ARGCGGRFLN TKKQDDNDEN  240
SSVEKGMNLD ANDSAQSAKS SFECFPNTSN GTFDSSNVQQ EGIPFHVW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.11e-39NF-YA family protein