PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g880650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 272aa MW: 30554.3 Da PI: 7.6395 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 109 | 2.2e-34 | 94 | 151 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCts+ C+vkk+vers +dp++v++tYeg+H+h+ Pd.00g880650.m01 94 EDGYRWRKYGQKAVKNSPFPRSYYRCTSTACNVKKRVERSFNDPSIVVTTYEGQHTHP 151 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MDVKKDVVKM EDNSTNIGYT IYPATPNSSS ISSASSEALN EEQTDNKGAA DQDEEEEHDQ 60 PKTKKELKAK KASQKRQREP RFAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT 120 STACNVKKRV ERSFNDPSIV VTTYEGQHTH PSPLIPRPTL TASASAQPNI STTFAMPSMP 180 RTLLSHHYQH QLQPFNFCNY VNGGSPTANA SSTGFHHERR FCTPATGSAM LTDHGLLQDI 240 VLLLILMVII TVTMEHGYFN PMQECALISF GE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 3e-53 | WRKY family protein |