PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g880110.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 525aa    MW: 56587.2 Da    PI: 7.2494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g880110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.2e-30271329259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+
  Pd.00g880110.m01 271 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 329
                       7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    
MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTNC NNNPPAVNTG LNLLTLNSGI  60
SSTSASDIHQ NSNNKLMTSL QVELERLHEE NGELKTMLDQ MTKSYSQLQA QLLIAMQKQA  120
QNRLREPIKC EANGMLARQF MDPRPSAAAA IDHVRDPSVA YSSGKTPADH EAFSSFAPSN  180
LNIEVMSTER DQYQRRLQTN INCAEEALDR SSQCLGSPNY TSKSSDPNLF DDDNDEPKRS  240
TDQEQVPVAD QIPFRKARVS VRARSEAPMI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAS  300
GCPVRKQVQR LAEDKTILIT TYEGNHSHPL PPAATAMANT TSAAAAMLLS ASAPFPTITL  360
DLTQSPMQQF HRIPPPFSST FPLPLHGYHQ LMGGPGHPIP GPTYFPPNYK ASPPPAGVSL  420
GGQRSTSTHA SGMIETVSAA IASDPNFTAA LAEAISTIMG APRPHQGHQG GININDGDIA  480
NNNAARGLVA STNNSPPSAN IGLPPGSLQP GSPQLPQSCT TFSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.19e-55WRKY family protein