PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g880110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 525aa MW: 56587.2 Da PI: 7.2494 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.7 | 3.2e-30 | 271 | 329 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g880110.m01 271 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 329 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 525 aa Download sequence |
MEKQGRRHHI SPKLFHHSVS DCSFNASDDG LVDATNNTNC NNNPPAVNTG LNLLTLNSGI 60 SSTSASDIHQ NSNNKLMTSL QVELERLHEE NGELKTMLDQ MTKSYSQLQA QLLIAMQKQA 120 QNRLREPIKC EANGMLARQF MDPRPSAAAA IDHVRDPSVA YSSGKTPADH EAFSSFAPSN 180 LNIEVMSTER DQYQRRLQTN INCAEEALDR SSQCLGSPNY TSKSSDPNLF DDDNDEPKRS 240 TDQEQVPVAD QIPFRKARVS VRARSEAPMI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAS 300 GCPVRKQVQR LAEDKTILIT TYEGNHSHPL PPAATAMANT TSAAAAMLLS ASAPFPTITL 360 DLTQSPMQQF HRIPPPFSST FPLPLHGYHQ LMGGPGHPIP GPTYFPPNYK ASPPPAGVSL 420 GGQRSTSTHA SGMIETVSAA IASDPNFTAA LAEAISTIMG APRPHQGHQG GININDGDIA 480 NNNAARGLVA STNNSPPSAN IGLPPGSLQP GSPQLPQSCT TFSTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 9e-55 | WRKY family protein |