PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 198aa    MW: 22565.6 Da    PI: 8.7996
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.68.6e-1842124290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA++vGF +r+ +s+ks+r+g+i++r + C     + ++        +++  +r  C+a++ +++ek g w+v+k+ ++HnH+l+
  Pd.00g876500.m01  42 FYDDYASRVGFLTRVLSSRKSERDGSIISRGLGCRGVSDNGRKVM------QKECGQREFCTAMVLLRQEKPGSWVVKKFLKDHNHPLV 124
                       9*********************************87766666554......488999******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR  60
KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN  120
HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV  180
QSVFENLKVL EAKAVGFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-61FAR1 family protein