PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g874160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 314aa MW: 35464.8 Da PI: 4.7866 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.2 | 9.3e-30 | 129 | 186 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh Pd.00g874160.m01 129 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 186 79*************************998**************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MENWDLQAVV RGCNTTANID EAMENSQIPY CFAPLSIEEE DDFFHALPQL FEATAALDEL 60 EELYKSFYPV LQPSTPPIIL ASSMSVPQEA ITVEVPKKLK ESSTICKKIS RKNQSKRVMK 120 EVRAEDLFSD VWAWRKYGQK PIKGSPYPRS YYRCSSSKGC SARKQVERSC SNPETFIITY 180 TAEHNHVHPT RRNSLAGSTR SKFPSSKNKD KCKSSLNSPA MTNLAASIEE DHDVQSASTN 240 AVKEEAQLLL EEVEISHENV MLDVMLSDEM IPSFEDLDRE LEPVMDGWFL DQFSDNFPSP 300 WFNIGHSNTV TGAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23550.1 | 5e-39 | WRKY family protein |