PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g873770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 567aa MW: 64423.6 Da PI: 6.3688

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g873770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.4e-07	466	510	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + WT+eE+++++d+ k + W++ +r + ++t+++++s+++++ Pd.00g873770.m01 466 LQWTAEEEKRFKDLLKSNSPSFWNRASRWFR-KKTRENLVSYYFNV 510 57***************************.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MLVALRGKTK KKAVPKNVQE IGDRGVVRPI PAVIDDRQPV DLFKLFCLVR DRGGYDWVSK 60 NSLWSFVAKE LGLDGGATAS VKLIYFKYLN ELEKWFRESC KSRSSGNGQS GLYGEFQLLS 120 LELEREFRDL LLDGPEQKGK GDGPVQFESD ENGKIEFNLS DTKDAYGMHA GADQCKDDDD 180 EKVCNDDQNG VMISLDSLNK NENYRKRKRE SLSGMLNWVV QIAKEPNDPS IGVIPGPTNW 240 KEHKGDECWF QVIRAREALL LRRNVDSKTE ESLLQKKLKT HPLLYEDNIV AGHQSSERLR 300 CSERFPNSVK SRSCPCCSSC SVPQSNLISP RKKELDNISK EQAPAEVDLL ATNTMVCPSV 360 DAPHEKHVSV GTLFQADVPE WTGVASESDI KWLGTRVWPL QCEEDSSLHE TDLTGKGRPD 420 LCGCRLPGSV VCIRFHIAEA RMKLKRELGS LFYRWRFDRM GEEVSLQWTA EEEKRFKDLL 480 KSNSPSFWNR ASRWFRKKTR ENLVSYYFNV FLVQSRSYQN RVTPKNIDSD DDETEFGSFS 540 NGFGHDAVEV SANFVACSHN QQCTDLD

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MLVALRGKTK KKAVPKNVQE IGDRGVVRPI PAVIDDRQPV DLFKLFCLVR DRGGYDWVSK  60
NSLWSFVAKE LGLDGGATAS VKLIYFKYLN ELEKWFRESC KSRSSGNGQS GLYGEFQLLS  120
LELEREFRDL LLDGPEQKGK GDGPVQFESD ENGKIEFNLS DTKDAYGMHA GADQCKDDDD  180
EKVCNDDQNG VMISLDSLNK NENYRKRKRE SLSGMLNWVV QIAKEPNDPS IGVIPGPTNW  240
KEHKGDECWF QVIRAREALL LRRNVDSKTE ESLLQKKLKT HPLLYEDNIV AGHQSSERLR  300
CSERFPNSVK SRSCPCCSSC SVPQSNLISP RKKELDNISK EQAPAEVDLL ATNTMVCPSV  360
DAPHEKHVSV GTLFQADVPE WTGVASESDI KWLGTRVWPL QCEEDSSLHE TDLTGKGRPD  420
LCGCRLPGSV VCIRFHIAEA RMKLKRELGS LFYRWRFDRM GEEVSLQWTA EEEKRFKDLL  480
KSNSPSFWNR ASRWFRKKTR ENLVSYYFNV FLVQSRSYQN RVTPKNIDSD DDETEFGSFS  540
NGFGHDAVEV SANFVACSHN QQCTDLD