PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g873180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 459aa MW: 51909.1 Da PI: 10.2835

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g873180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.3e-19	84	166	5	90
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +YA+e+GFsvr +skks ++ge++++++vC+keg+ ++e+++ +r+r + r +Cka+l v k+k g ++vt +e+ H+H+++ Pd.00g873180.m01 84 QYAREAGFSVRSYSSKKS-KDGEVIRKEYVCNKEGSWSTETSS--VVKRRRGVGRESCKARLIVVKSKYGGYVVTIFEEAHTHPMT 166 7***********9999.8889************9988..77888999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MDYWAEPTGK YSRALGSKAV GQKRWALWDA VGRLEKLGMA SLEGGSWSRS WLGRSGKLQP 60 VAIKGMYTTR ARSWKIRSGE NITQYAREAG FSVRSYSSKK SKDGEVIRKE YVCNKEGSWS 120 TETSSVVKRR RGVGRESCKA RLIVVKSKYG GYVVTIFEEA HTHPMTTPRR RHLLKSHRPI 180 SGVDQLVAQQ LISVNVSTHQ QYDILATQAG GIENVGFTQQ DMYNSNRDRR MKIKDHDGEM 240 LFDHFMNEQE KNPGFIFKLH ELPDQYILKR WTRSARSDLV VDNDGVEISV DNSLIGKRSA 300 LFQRYSNVID KVILSDEASQ IFCETLDSLI ERIKPLLHGA EEVLPSARRS IAFETSINEP 360 NPVKAKGSGK RLKGRKELAR EKYKGRCCNG CGKYGQTHDK RNCPMLQKSS SNVDKDAFNG 420 MDNSSSSQMM FRSPVIPPSC RVALTYLKKR LFPNQASCS

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MDYWAEPTGK YSRALGSKAV GQKRWALWDA VGRLEKLGMA SLEGGSWSRS WLGRSGKLQP  60
VAIKGMYTTR ARSWKIRSGE NITQYAREAG FSVRSYSSKK SKDGEVIRKE YVCNKEGSWS  120
TETSSVVKRR RGVGRESCKA RLIVVKSKYG GYVVTIFEEA HTHPMTTPRR RHLLKSHRPI  180
SGVDQLVAQQ LISVNVSTHQ QYDILATQAG GIENVGFTQQ DMYNSNRDRR MKIKDHDGEM  240
LFDHFMNEQE KNPGFIFKLH ELPDQYILKR WTRSARSDLV VDNDGVEISV DNSLIGKRSA  300
LFQRYSNVID KVILSDEASQ IFCETLDSLI ERIKPLLHGA EEVLPSARRS IAFETSINEP  360
NPVKAKGSGK RLKGRKELAR EKYKGRCCNG CGKYGQTHDK RNCPMLQKSS SNVDKDAFNG  420
MDNSSSSQMM FRSPVIPPSC RVALTYLKKR LFPNQASCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-17	FAR1 family protein